Evidence map›Paper›PMID 36671154›Full record

ArticlePhysical review. E2022

Feature learning and network structure from noisy node activity data.

Junyao Kuang, Caterina Scoglio, Kristin Michel

Abstract read
In one paragraph

Article in Physical review. E, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Junyao KuangDepartment of Electrical and Computer Engineering, Kansas State University, Manhattan, Kansas 66506, USA.
Caterina ScoglioDepartment of Electrical and Computer Engineering, Kansas State University, Manhattan, Kansas 66506, USA.
Kristin MichelDivision of Biology, Kansas State University, Manhattan, Kansas 66506, USA.

Funding

The protease network that regulates innate immunity in mosquitoesR01AI140760 · NIAID · KANSAS STATE UNIVERSITY · PI MICHEL, KRISTIN · 2018 to 2022
$2.8M
NIAID NIH HHS R01 AI140760
6 · The paper itself

Abstract

In the studies of network structures, much attention has been devoted to developing approaches to reconstruct networks and predict missing links when edge-related information is given. However, such approaches are not applicable when we are only given noisy node activity data with missing values. This work presents an unsupervised learning framework to learn node vectors and construct networks from such node activity data. First, we design a scheme to generate random node sequences from node context sets, which are generated from node activity data. Then, a three-layer neural network is adopted training the node sequences to obtain node vectors, which allow us to construct networks and capture nodes with synergistic roles. Furthermore, we present an entropy-based approach to select the most meaningful neighbors for each node in the resulting network. Finally, the effectiveness of the method is validated through both synthetic and real data.

Indexed as

AlgorithmsNeural Networks, ComputerEntropy

Identifiers

PMID36671154
PMCPMC9869472

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.