Evidence map›Paper›PMID 36668852›Full record

ArticleToxins2022

Charged Amino Acids Contribute to ZorO Toxicity.

Bikash Bogati, Selene F H Shore, Thomas D Nipper, Oana Stoiculescu, Elizabeth M Fozo

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Mechanism of action ofFrontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Bikash BogatiDepartment of Microbiology, University of Tennessee Knoxville, Knoxville, TN 37996, USA.ORCID 0000-0002-9069-6632
Selene F H ShoreDepartment of Microbiology, University of Tennessee Knoxville, Knoxville, TN 37996, USA.ORCID 0000-0003-3029-4604
Thomas D NipperDepartment of Microbiology, University of Tennessee Knoxville, Knoxville, TN 37996, USA.
Oana StoiculescuDepartment of Microbiology, University of Tennessee Knoxville, Knoxville, TN 37996, USA.ORCID 0000-0002-8315-6013
Elizabeth M FozoDepartment of Microbiology, University of Tennessee Knoxville, Knoxville, TN 37996, USA.ORCID 0000-0002-6928-2275
University of Tennessee at Knoxville · US

Funding

Small proteins in sugar metabolismR15GM106291 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI FOZO, ELIZABETH M. · 2014 to 2014
$329k
NIGMS NIH HHS R15 GM106291
6 · The paper itself

Abstract

Chromosomally encoded toxin-antitoxin systems have been increasingly identified and characterized across bacterial species over the past two decades. Overproduction of the toxin gene results in cell growth stasis or death for the producing cell, but co-expression of its antitoxin can repress the toxic effects. For the subcategory of type I toxin-antitoxin systems, many of the described toxin genes encode a small, hydrophobic protein with several charged residues distributed across the sequence of the toxic protein. Though these charged residues are hypothesized to be critical for the toxic effects of the protein, they have not been studied broadly across different type I toxins. Herein, we mutated codons encoding charged residues in the type I toxin

Indexed as

AntitoxinsBacterial ToxinsEscherichia coli ProteinsAmino AcidsBacterial ProteinsEscherichia coliGene Expression Regulation, BacterialPromoter Regions, GeneticAmino AcidsAntitoxinsBacterial ProteinsBacterial ToxinsEscherichia coli ProteinsZorO protein, E coliaminoglycosidescharged residuessmall proteintype I toxin-antitoxinZorO

Identifiers

PMID36668852
PMCPMC9860968
OpenAlexW4313473076

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.