Evidence map›Paper›PMID 36661295›Full record

ArticleRheumatology (Oxford, England)2023

Urine proteomics by mass spectrometry identifies proteins involved in key pathogenic pathways in patients with juvenile dermatomyositis.

Melissa Morales, Tchilabalo D Alayi, Shefa M Tawalbeh, Agnes V Sydenstricker, Rita Spathis, Hanna Kim, Kanneboyina Nagaraju, Yetrib Hathout, Lisa G Rider

Open access · hybridAbstract read
In one paragraph

Article in Rheumatology (Oxford, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Melissa MoralesDepartment of Pharmaceutical Sciences, Binghamton University-State University of New York, Binghamton, NY, USA.ORCID 0000-0001-5681-5653
Tchilabalo D AlayiDepartment of Pharmaceutical Sciences, Binghamton University-State University of New York, Binghamton, NY, USA.
Shefa M TawalbehDepartment of Biomedical Systems and Informatics Engineering, Yarmouk University, Irbid, Jordan.
Agnes V SydenstrickerDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, NY, USA.
Rita SpathisDepartment of Pharmaceutical Sciences, Binghamton University-State University of New York, Binghamton, NY, USA.
Hanna KimJuvenile Myositis Pathogenesis and Therapeutics Unit, National Institute of Arthritis Musculoskeletal and Skin Diseases, National Institutes of Health (NIH), Bethesda, MD, USA.ORCID 0000-0002-0595-6533
Kanneboyina NagarajuDepartment of Pharmaceutical Sciences, Binghamton University-State University of New York, Binghamton, NY, USA.
Yetrib HathoutDepartment of Pharmaceutical Sciences, Binghamton University-State University of New York, Binghamton, NY, USA.
Lisa G RiderEnvironmental Autoimmunity Group, Clinical Research Branch, National Institute of Environmental Health Sciences (NIEHS), National Institutes of Health (NIH), Bethesda, MD, USA.ORCID 0000-0002-6912-2458
Binghamton University · USNational Institutes of Health · USAlbert Einstein College of Medicine · USYarmouk University · JO

Funding

Environmental/genetic Risk Factors and Pathogenesis of Autoimmune DiseaseZIAES101074 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI RIDER, LISA · 2009 to 2025
$34.6M
Assessment, Therapy and Prevention Of Autoimmune DiseaseZIAES101081 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI RIDER, LISA · 2009 to 2025
$17.6M
Pathogenesis And Genetic/environmental Risk Factors ForZ01ES101074 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MILLER, FREDERICK · 2002 to 2008
$2.7M
Assessment, Therapy and Prevention Of Autoimmune DiseaseZ01ES101081 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MILLER, FREDERICK · 2002 to 2008
$2.2M
Intramural NIH HHS Z01 ES101074Intramural NIH HHS Z01 ES101081Intramural NIH HHS ZIA ES101074Intramural NIH HHS ZIA ES101081
6 · The paper itself

Abstract

objectivesTo identify and validate biomarkers in JDM patients using a multiplexing tandem mass tag urine proteome profiling approach.

methodsFirst morning void urine samples were collected from JDM patients (n = 20) and healthy control subjects (n = 21) and processed for analysis using a standardized liquid chromatography-tandem mass spectrometry approach. Biomarkers with significantly altered levels were correlated with clinical measures of myositis disease activity and damage. A subset of candidate biomarkers was validated using commercially available ELISA kits.

resultsIn total, 2348 proteins were detected in the samples, with 275 proteins quantified across all samples. Among the differentially altered proteins, cathepsin D and galectin-3 binding protein were significantly increased in the urine of JDM patients (adjusted P < 0.05), supporting previous findings in myositis patients. These two candidate biomarkers were confirmed with ELISAs. Cathepsin D positively correlated with Myositis Damage Index (r = 0.57, P < 0.05) and negatively correlated with the Childhood Myositis Assessment Scale (r = -0.54, P < 0.05). We also identified novel JDM candidate biomarkers involved with key features of myositis, including extracellular matrix remodelling proteins.

conclusionThis study confirmed the presence of several proteins in the urine of JDM patients that were previously found to be elevated in the blood of myositis patients and identified novel candidate biomarkers that require validation. These results support the use of urine as a source for biomarker development in JDM.

Indexed as

DermatomyositisMyositisCathepsin DChildHumansMass SpectrometryProteomicsCathepsin Dcathepsin Dgalectin-3 binding proteinJDMmyositistandem mass tag labellingurine proteomics

Identifiers

PMID36661295
PMCPMC10473190
OpenAlexW4317538592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.