Evidence map›Paper›PMID 36659852›Full record

ArticleBiophysical journal2023

Dynamic microtubules slow down during their shrinkage phase.

Anna Luchniak, Yin-Wei Kuo, Catherine McGuinness, Sabyasachi Sutradhar, Ron Orbach, Mohammed Mahamdeh, Jonathon Howard

Open access · hybridAbstract read
In one paragraph

Article in Biophysical journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Structural switching of tubulin in the microtubule lattice.Biochemical Society transactions · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anna LuchniakDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Yin-Wei KuoDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Catherine McGuinnessDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Sabyasachi SutradharDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Ron OrbachDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Mohammed MahamdehDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut.
Jonathon HowardDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, Connecticut. Electronic address: joe.howard@yale.edu.
Yale University · US

Funding

Dendrite structure: Data-Driven Models to Bridge from Molecules to MorphologyR01NS118884 · NINDS · YALE UNIVERSITY · PI HOWARD, JONATHON · 2021 to 2025
$2.0M
Control of microtubule length by polymerases and depolymerasesR01GM110386 · NIGMS · YALE UNIVERSITY · PI HOWARD, JONATHON · 2014 to 2017
$1.6M
Microtubule Severing and Regrowth by SpastinR01GM139337 · NIGMS · YALE UNIVERSITY · PI HOWARD, JONATHON · 2020 to 2023
$1.3M
NIGMS NIH HHS R01 GM110386NIGMS NIH HHS R01 GM139337NINDS NIH HHS R01 NS118884
6 · The paper itself

Abstract

Microtubules are dynamic polymers that undergo stochastic transitions between growing and shrinking phases. The structural and chemical properties of these phases remain poorly understood. The transition from growth to shrinkage, termed catastrophe, is not a first-order reaction but rather a multistep process whose frequency increases with the growth time: the microtubule ages as the older microtubule tip becomes more unstable. Aging shows that the growing phase is not a single state but comprises several substates of increasing instability. To investigate whether the shrinking phase is also multistate, we characterized the kinetics of microtubule shrinkage following catastrophe using an in vitro reconstitution assay with purified tubulins. We found that the shrinkage speed is highly variable across microtubules and that the shrinkage speed of individual microtubules slows down over time by as much as several fold. The shrinkage slowdown was observed in both fluorescently labeled and unlabeled microtubules as well as in microtubules polymerized from tubulin purified from different species, suggesting that the shrinkage slowdown is a general property of microtubules. These results indicate that microtubule shrinkage, like catastrophe, is time dependent and that the shrinking microtubule tip passes through a succession of states of increasing stability. We hypothesize that the shrinkage slowdown is due to destabilizing events that took place during growth, which led to multistep catastrophe. This suggests that the aging associated with growth is also manifested during shrinkage, with the older, more unstable growing tip being associated with a faster depolymerizing shrinking tip.

Indexed as

MicrotubulesTubulinPolymersPolymersTubulin

Identifiers

PMID36659852
PMCPMC9989939
OpenAlexW4317495067

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.