Evidence map›Paper›PMID 36658630›Full record

ArticleParasites & vectors2023

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for differential identification of adult Schistosoma worms.

Jurena Christiane Ebersbach, Marcello Otake Sato, Matheus Pereira de Araújo, Megumi Sato, Sören L Becker, Issa Sy

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Jurena Christiane EbersbachInstitute of Medical Microbiology and Hygiene, Saarland University, Homburg, Germany.
Marcello Otake SatoLaboratory of Tropical Medicine and Parasitology, Dokkyo Medical University, Mibu, Tochigi, Japan.
Matheus Pereira de AraújoLaboratory of Tropical Medicine and Parasitology, Dokkyo Medical University, Mibu, Tochigi, Japan.
Megumi SatoGraduate School of Health Sciences, Niigata University, Niigata, Japan.
Sören L BeckerInstitute of Medical Microbiology and Hygiene, Saarland University, Homburg, Germany.
Issa SyInstitute of Medical Microbiology and Hygiene, Saarland University, Homburg, Germany. issa.sy@uks.eu.
Dokkyo Medical University · JPSaarland University · DEInstitute of Medical Microbiology and Hygiene · DENiigata University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSchistosomiasis is a major neglected tropical disease that affects up to 250 million individuals worldwide. The diagnosis of human schistosomiasis is mainly based on the microscopic detection of the parasite's eggs in the feces (i.e., for Schistosoma mansoni or Schistosoma japonicum) or urine (i.e., for Schistosoma haematobium) samples. However, these techniques have limited sensitivity, and microscopic expertise is waning outside endemic areas. Matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) has become the gold standard diagnostic method for the identification of bacteria and fungi in many microbiological laboratories. Preliminary studies have recently shown promising results for parasite identification using this method. The aims of this study were to develop and validate a species-specific database for adult Schistosoma identification, and to evaluate the effects of different storage solutions (ethanol and RNAlater) on spectra profiles.

methodsAdult worms (males and females) of S. mansoni and S. japonicum were obtained from experimentally infected mice. Species identification was carried out morphologically and by cytochrome oxidase 1 gene sequencing. Reference protein spectra for the creation of an in-house MALDI-TOF MS database were generated, and the database evaluated using new samples. We employed unsupervised (principal component analysis) and supervised (support vector machine, k-nearest neighbor, Random Forest, and partial least squares discriminant analysis) machine learning algorithms for the identification and differentiation of the Schistosoma species.

resultsAll the spectra were correctly identified by internal validation. For external validation, 58 new Schistosoma samples were analyzed, of which 100% (58/58) were correctly identified to genus level (log score values ≥ 1.7) and 81% (47/58) were reliably identified to species level (log score values ≥ 2). The spectra profiles showed some differences depending on the storage solution used. All the machine learning algorithms classified the samples correctly.

conclusionsMALDI-TOF MS can reliably distinguish adult S. mansoni from S. japonicum.

Indexed as

FungiSchistosoma japonicumAdultAnimalsBacteriaFemaleHumansLasersMiceSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationHelminthIdentificationMachine learningMatrix-assisted laser desorption/ionization-time of flight mass spectrometrySchistosoma japonicumSchistosoma mansoniStorage mediaTrematode

Identifiers

PMID36658630
PMCPMC9854196
OpenAlexW4317436379

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.