Evidence map›Paper›PMID 36658391›Full record

ArticleNature plants2023

Stomatal regulators are co-opted for seta development in the astomatous liverwort Marchantia polymorpha.

Kenta C Moriya, Makoto Shirakawa, Jeanne Loue-Manifel, Yoriko Matsuda, Yen-Ting Lu, Kentaro Tamura, Yoshito Oka, Tomonao Matsushita, Ikuko Hara-Nishimura, Gwyneth Ingram and 4 more

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In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 3 countries.

Kenta C MoriyaGraduate School of Science, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0003-4917-6982
Makoto ShirakawaGraduate School of Biological Sciences, Nara Institute of Science and Technology (NAIST), Ikoma, Japan.
Jeanne Loue-ManifelLaboratoire Reproduction et Développement des Plantes, ENS de Lyon, CNRS, INRAE, UCB Lyon 1, Lyon, France.
Yoriko MatsudaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Yen-Ting LuGraduate School of Biological Sciences, Nara Institute of Science and Technology (NAIST), Ikoma, Japan.ORCID http://orcid.org/0000-0001-5557-9054
Kentaro TamuraSchool of Food and Nutritional Sciences, University of Shizuoka, Shizuoka, Japan.
Yoshito OkaGraduate School of Science, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-6703-9853
Tomonao MatsushitaGraduate School of Science, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-7735-8567
Ikuko Hara-NishimuraFaculty of Science and Engineering, Konan University, Kobe, Japan.
Gwyneth IngramLaboratoire Reproduction et Développement des Plantes, ENS de Lyon, CNRS, INRAE, UCB Lyon 1, Lyon, France.ORCID http://orcid.org/0000-0002-1425-9545
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-7032-732X
Justin GoodrichInstitute of Molecular Plant Sciences, University of Edinburgh, Daniel Rutherford Building, Max Born Crescent, Edinburgh, UK.
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID http://orcid.org/0000-0002-9712-4872
Tomoo ShimadaGraduate School of Science, Kyoto University, Kyoto, Japan. tshimada@gr.bot.kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-2101-1003
Kyoto University · JPNara Institute of Science and Technology · JPUniversité Claude Bernard Lyon 1 · FRKonan University · JPTokyo University of Science · JPUniversity of Edinburgh · GBUniversity of Shizuoka · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) JP12J05453MEXT | Japan Society for the Promotion of Science (JSPS) JP15H05776MEXT | Japan Society for the Promotion of Science (JSPS) JP18K06283MEXT | Japan Society for the Promotion of Science (JSPS) JP18K06284MEXT | Japan Society for the Promotion of Science (JSPS) JP18K19964MEXT | Japan Society for the Promotion of Science (JSPS) JP19K06722MEXT | Japan Society for the Promotion of Science (JSPS) JP20H04884MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05416MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05905MEXT | Japan Society for the Promotion of Science (JSPS) JP20H05906MEXT | Japan Society for the Promotion of Science (JSPS) JP21J14990MEXT | Japan Society for the Promotion of Science (JSPS) JP26711017
6 · The paper itself

Abstract

The evolution of special types of cells requires the acquisition of new gene regulatory networks controlled by transcription factors (TFs). In stomatous plants, a TF module formed by subfamilies Ia and IIIb basic helix-loop-helix TFs (Ia-IIIb bHLH) regulates stomatal formation; however, how this module evolved during land plant diversification remains unclear. Here we show that, in the astomatous liverwort Marchantia polymorpha, a Ia-IIIb bHLH module regulates the development of a unique sporophyte tissue, the seta, which is found in mosses and liverworts. The sole Ia bHLH gene, MpSETA, and a IIIb bHLH gene, MpICE2, regulate the cell division and/or differentiation of seta lineage cells. MpSETA can partially replace the stomatal function of Ia bHLH TFs in Arabidopsis thaliana, suggesting that a common regulatory mechanism underlies setal and stomatal formation. Our findings reveal the co-option of a Ia-IIIb bHLH TF module for regulating cell fate determination and/or cell division of distinct types of cells during land plant evolution.

Indexed as

ArabidopsisEmbryophytaMarchantiaGene Expression Regulation, PlantPlant ProteinsPlantsTranscription FactorsPlant ProteinsTranscription Factors

Identifiers

PMID36658391
OpenAlexW4317500752

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.