Evidence map›Paper›PMID 36658331›Full record

ArticlePediatric research2023

Vaccine evaluation and genotype characterization in children infected with rotavirus in Qatar.

Shilu Mathew, Hebah A Al Khatib, Malak Al Ibrahim, Khalid Al Ansari, Maria K Smatti, Gheyath K Nasrallah, Emad Ibrahim, Asmaa A Al Thani, Hassan Zaraket, Hadi M Yassine

Open access · hybridAbstract read
In one paragraph

Article in Pediatric research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Frontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Shilu Mathew *Biomedical Research Center, Qatar University, 2713, Doha, Qatar.
Hebah A Al Khatib *Biomedical Research Center, Qatar University, 2713, Doha, Qatar.
Malak Al IbrahimDepartment of Experimental Pathology, Immunology, and Microbiology, American University of Beirut, Beirut, Lebanon.
Khalid Al AnsariEmergency Medicine Department, Sidra Medicine, Doha, Qatar.
Maria K SmattiBiomedical Research Center, Qatar University, 2713, Doha, Qatar.
Gheyath K NasrallahBiomedical Research Center, Qatar University, 2713, Doha, Qatar.
Emad IbrahimDivision of Clinical Microbiology, Department of Laboratory Medicine and Pathology, Microbiology Section, Hamad Medical Corporation, Doha, Qatar.
Asmaa A Al ThaniBiomedical Research Center, Qatar University, 2713, Doha, Qatar.
Hassan ZaraketDepartment of Experimental Pathology, Immunology, and Microbiology, American University of Beirut, Beirut, Lebanon. hz34@aub.edu.lb.
Hadi M YassineBiomedical Research Center, Qatar University, 2713, Doha, Qatar. hyassine@qu.edu.qa.
Qatar University · QAAmerican University of Beirut · LBAmerican University of Beirut Medical Center · LBHamad Medical Corporation · QA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe characterized and identified the genetic and antigenic variations of circulating rotavirus strains in comparison to used rotavirus vaccines.

methodsRotavirus-positive samples (n = 231) were collected and analyzed. The VP7 and VP4 genes were sequenced and analyzed against the rotavirus vaccine strains. Antigenic variations were illustrated on the three-dimensional models of surface proteins.

resultsIn all, 59.7% of the hospitalized children were vaccinated, of which only 57.2% received two doses. There were no significant differences between the vaccinated and non-vaccinated groups in terms of clinical outcome. The G3 was the dominant genotype (40%) regardless of vaccination status. Several amino acid changes were identified in the VP7 and VP4 antigenic epitopes compared to the licensed vaccines. The highest variability was seen in the G3 (6 substitutions) and P[4] (11 substitutions) genotypes in comparison to RotaTeq®. In comparison to Rotarix®, G1 strains possessed three amino acid changes in 7-1a and 7-2 epitopes while P[8] strains possessed five amino acid changes in 8-1 and 8-3 epitopes.

conclusionsThe current use of Rotarix® vaccine might not be effective in preventing the infection due to the higher numbers of G3-associated cases. The wide range of mutations in the antigenic epitopes compared to vaccine strains may compromise the vaccine's effectiveness. IMPACT: The reduced rotavirus vaccine effectiveness necessitate regular evaluation of the vaccine content to ensure optimal protection. We characterized and identified the genetic and antigenic variations of circulating rotavirus strains in comparison to the Rotarix vaccine strain that is used in Qatar. The study highlight the importance for regular monitoring of emerging rotavirus variants and their impact on vaccine effectiveness in young children.

Indexed as

RotavirusRotavirus InfectionsAntigens, ViralCapsid ProteinsChildChild, PreschoolEpitopesGenotypeHumansInfantQatarAntigens, ViralCapsid ProteinsEpitopes

Identifiers

PMID36658331
PMCPMC10382313
OpenAlexW4317433366

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.