Evidence map›Paper›PMID 36658111›Full record

ArticleNature communications2023

Phylogeography and transmission of Mycobacterium tuberculosis spanning prisons and surrounding communities in Paraguay.

Gladys Estigarribia Sanabria, Guillermo Sequera, Sarita Aguirre, Julieta Méndez, Paulo César Pereira Dos Santos, Natalie Weiler Gustafson, Margarita Godoy, Analía Ortiz, Cynthia Cespedes, Gloria Martínez and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Transmission ofEpidemiology and infection · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. SpecificMicroorganisms · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Gladys Estigarribia Sanabria *Instituto Regional de Investigación en Salud, Caaguazú, Paraguay. lalyestigarr@gmail.com.ORCID 0000-0001-8058-9369
Guillermo Sequera *Instituto de Salud Global de Barcelona (ISGLOBAL), Barcelona, Spain.
Sarita AguirrePrograma Nacional de Control de la Tuberculosis, Ministerio de Salud Pública y Bienestar Social (MSPyBS), Asunción, Paraguay.
Julieta MéndezInstituto Regional de Investigación en Salud, Caaguazú, Paraguay.
Paulo César Pereira Dos SantosPostgraduate Program in Infectious and Parasitic Diseases, Federal University of Mato Grosso do Sul, Mato Grosso do Sul, Brazil.
Natalie Weiler GustafsonLaboratorio Central de Salud Pública (LCSP), Ministerio de Salud Publica y Bienestar Social (MSPyBS), Asunción, Paraguay.
Margarita GodoyLaboratorio Central de Salud Pública (LCSP), Ministerio de Salud Publica y Bienestar Social (MSPyBS), Asunción, Paraguay.
Analía OrtizInstituto Regional de Investigación en Salud, Caaguazú, Paraguay.
Cynthia CespedesPrograma Nacional de Control de la Tuberculosis, Ministerio de Salud Pública y Bienestar Social (MSPyBS), Asunción, Paraguay.
Gloria MartínezInstituto Regional de Investigación en Salud, Caaguazú, Paraguay.
Alberto L García-BasteiroInstituto de Salud Global de Barcelona (ISGLOBAL), Barcelona, Spain.ORCID 0000-0002-2038-5505
Jason R AndrewsDivision of Infectious Diseases and Geographic Medicine, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0002-5967-251X
Julio CrodaFederal University of Mato Grosso do Sul - UFMS, Campo Grande, MS, Brazil.ORCID 0000-0002-6665-6825
Katharine S WalterDivision of Epidemiology, University of Utah, Salt Lake City, UT, 84105, USA. katharine.walter@hsc.utah.edu.ORCID 0000-0003-0065-2204

Funding

Strategies for tuberculosis control in prisonsR01AI130058 · NIAID · STANFORD UNIVERSITY · PI Jason Randolph Andrews, Julio Henrique Rosa Croda · 2017 to 2026
$5.8M
Characterizing infectiousness of subclinical TB and identifying novel early diagnostic strategies for preventing transmissionR01AI149620 · NIAID · STANFORD UNIVERSITY · PI ANDREWS, JASON RANDOLPH, CRODA, JULIO · 2020 to 2023
$617k
Leveraging within-host M. tuberculosis diversity data to enhance transmission inferenceK01AI173385 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Katharine Sassandra Walter · 2023 to 2026
$528k
NIAID NIH HHS K01 AI173385NIAID NIH HHS R01 AI130058NIAID NIH HHS R01 AI149620
6 · The paper itself

Abstract

Recent rises in incident tuberculosis (TB) cases in Paraguay and the increasing concentration of TB within prisons highlight the urgency of targeting strategies to interrupt transmission and prevent new infections. However, whether specific cities or carceral institutions play a disproportionate role in transmission remains unknown. We conducted prospective genomic surveillance, sequencing 471 Mycobacterium tuberculosis complex genomes, from inside and outside prisons in Paraguay's two largest urban areas, Asunción and Ciudad del Este, from 2016 to 2021. We found genomic evidence of frequent recent transmission within prisons and transmission linkages spanning prisons and surrounding populations. We identified a signal of frequent M. tuberculosis spread between urban areas and marked recent population size expansion of the three largest genomic transmission clusters. Together, our findings highlight the urgency of strengthening TB control programs to reduce transmission risk within prisons in Paraguay, where incidence was 70 times that outside prisons in 2021.

Indexed as

Mycobacterium tuberculosisTuberculosisHumansParaguayPhylogeographyPrisonsProspective Studies

Identifiers

PMID36658111
PMCPMC9849832

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.