Evidence map›Paper›PMID 36655122›Full record

ArticleACS medicinal chemistry letters2023

Structural and Functional Characterization of Indane-Core CD4-Mimetic Compounds Substituted with Heterocyclic Amines.

Cheyenne Chaplain, Christopher J Fritschi, Saumya Anang, Zhen Gong, Jonathan Richard, Catherine Bourassa, Shuaiyi Liang, Mohammadjavad Mohammadi, Jun Park, Andrés Finzi and 5 more

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Cheyenne ChaplainDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Christopher J FritschiDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Saumya AnangDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute and Department of Microbiology, Harvard Medical School, Boston, Massachusetts 02215, United States.
Zhen GongDepartment of Biochemistry and Molecular Biophysics and Department of Physiology and Cellular Biophysics, Columbia University, New York, New York 10032, United States.
Jonathan RichardCentre de Recherche du CHUM, Montreal H2X 0A9, Canada.
Catherine BourassaCentre de Recherche du CHUM, Montreal H2X 0A9, Canada.
Shuaiyi LiangDepartment of Biochemistry and Molecular Biophysics and Department of Physiology and Cellular Biophysics, Columbia University, New York, New York 10032, United States.
Mohammadjavad MohammadiDepartment of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States.
Jun ParkDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.
Andrés FinziCentre de Recherche du CHUM, Montreal H2X 0A9, Canada.
Navid MadaniDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute and Department of Microbiology, Harvard Medical School, Boston, Massachusetts 02215, United States.
Joseph G SodroskiDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute and Department of Microbiology, Harvard Medical School, Boston, Massachusetts 02215, United States.
Cameron F AbramsDepartment of Chemical and Biological Engineering, Drexel University, Philadelphia, Pennsylvania 19104, United States.ORCID https://orcid.org/0000-0002-1240-0816
Wayne A HendricksonDepartment of Biochemistry and Molecular Biophysics and Department of Physiology and Cellular Biophysics, Columbia University, New York, New York 10032, United States.
Amos B SmithDepartment of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.ORCID https://orcid.org/0000-0002-1712-8567
University of Pennsylvania · USCentre Hospitalier de l’Université de Montréal · CAColumbia University · USHarvard University · USDrexel University · US

Funding

Understanding Envelope Function in HIV-1 Infection: The Design, Synthesis and Validation of Small Molecule HIV-1 Env InhibitorsP01AI150471 · NIAID · DREXEL UNIVERSITY · PI HENDRICKSON, WAYNE A. · 2019 to 2022
$7.8M
Reducing viral reservoirs by opening HIV-1 Env to antibody attackR33AI129017 · NIAID · DANA-FARBER CANCER INST · PI SODROSKI, JOSEPH G · 2019 to 2021
$1.6M
NIAID NIH HHS P01 AI150471NIAID NIH HHS R33 AI129017
6 · The paper itself

Abstract

The human immunodeficiency virus (HIV-1) envelope glycoprotein (Env) trimer on the virion surface interacts with the host receptors, CD4 and CCR5/CXCR4, to mediate virus entry into the target cell. CD4-mimetic compounds (CD4mcs) bind the gp120 Env, block CD4 binding, and inactivate Env. Previous studies suggested that a C(5)-methylamino methyl moiety on a lead CD4mc, BNM-III-170, contributed to its antiviral potency. By replacing the C(5) chain with differentially substituted pyrrolidine, piperidine, and piperazine ring systems, guided by structural and computational analyses, we found that the 5-position of BNM-III-170 is remarkably tolerant of a variety of ring sizes and substitutions, both in regard to antiviral activity and sensitization to humoral responses. Crystallographic analyses of representative analogues from the pyrrolidine series revealed the potential for 5-substituents to hydrogen bond with gp120 Env residue Thr 283. Further optimization of these interactions holds promise for the development of CD4mcs with greater potency.

Identifiers

PMID36655122
PMCPMC9841591
OpenAlexW4311654282

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.