Evidence map›Paper›PMID 36653904›Full record

ArticleCancer medicine2023

Genetic alterations of GI-NECs involving three main signaling pathways.

Qiong Dai, Jinping Zhang, Weili Long, Johannes Haybaeck, Zhihui Yang

Open access · goldAbstract read
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Article in Cancer medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Qiong DaiDepartment of Human Anatomy, Southwest Medical University, Luzhou, Sichuan, China.
Jinping ZhangDepartment of Pathology, The Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, China.ORCID 0000-0003-2139-5366
Weili LongDepartment of Pathology, The Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, China.
Johannes HaybaeckInstitute of Pathology, Neuropathology and Molecular Pathology, Medical University of Innsbruck, Innsbruck, Austria.
Zhihui YangDepartment of Pathology, The Affiliated Hospital of Southwest Medical University, Luzhou, Sichuan, China.
Affiliated Hospital of Southwest Medical University · CNInnsbruck Medical University · ATSouthwest Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGastrointestinal (GI)-neuroendocrine neoplasms (NENs) are subclassified in neuroendocrine tumors (NETs), neuroendocrine carcinomas (NECs), and mixed neuroendocrine-non-neuroendocrine neoplasms (MiNENs). The genetic characteristics of GI-NEN has been a hot issue in recent years, but more studies are needed to provide further details. This study aims to provide additional data about genomic characteristics of GI-NENs and the genetic differences between NETs and NECs. PATIENTS AND

methodsThirteen samples were selected for next-generation sequencing (NGS) analysis with a 425-gene panel. Microsatellite instability (MSI) and tumor mutational burden (TMB) were calculated as well as immunohistochemistry (IHC) was used to test for protein expression.

resultsGenetic alterations were very common in NECs, but rare in NETs. The average TMB of NETs and NECs was 2.3 and 6.9, respectively. The TMB of NECs was significantly higher compared to NETs. The TP53 mutation rate was significantly higher in NECs than in NETs (100% vs. 20%), other mutations involved MTOR (n = 2, 15.4%), DDR2 (n = 3, 23.1%), ERBB4 (n = 1, 7.7%), BRCA1 (n = 1, 7.7%), BRCA2 (n = 1, 7.7%), ATM (n = 1, 7.7%), and SMAD4 (n = 1, 7.7%). Deep loss of SMAD4 (1/3, 33.3%), SDHB (1/3, 33.3%), RB1 (1/3, 33.3%), and BRCA2 (1/3, 33.3%), high-level amplification of CRKL (1/3, 33.3%), CCNE1(1/3, 33.3%), and MCL1(1/3, 33.3%) were found in NECs. The integrated analysis found these genetic alterations frequently involve DNA repair and cell cycle, PI3K/AKT/mTOR and TGF-β/SMAD4 signaling pathways.

conclusionGenetic alterations were very common in NECs and rare in NETs, and frequently involved three main signaling pathways. NEC patients harboring these genetic alterations may benefit from targeted therapy and PD-1/PD-L1 immunotherapy.

Indexed as

Carcinoma, NeuroendocrineGastrointestinal NeoplasmsNeuroendocrine TumorsBiomarkers, TumorHumansMutationPhosphatidylinositol 3-KinasesSignal TransductionTOR Serine-Threonine KinasesBiomarkers, TumorPhosphatidylinositol 3-KinasesTOR Serine-Threonine Kinases

Identifiers

PMID36653904
PMCPMC10134267
OpenAlexW4317480266

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