Evidence map›Paper›PMID 36653893›Full record

ArticleFEBS letters2023

Crystal structures of OrfX1, OrfX2 and the OrfX1-OrfX3 complex from the orfX gene cluster of botulinum neurotoxin E1.

Linfeng Gao, Kwok-Ho Lam, Shun Liu, Adina Przykopanski, Johanna Lübke, Ruifeng Qi, Maren Krüger, Maria B Nowakowska, Katja Selby, François P Douillard and 6 more

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Linfeng GaoDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.
Kwok-Ho LamDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.
Shun LiuDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.
Adina PrzykopanskiInstitute of Toxicology, Hannover Medical School, Germany.
Johanna LübkeInstitute of Toxicology, Hannover Medical School, Germany.
Ruifeng QiDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.
Maren KrügerBiological Toxins, Centre for Biological Threats and Special Pathogens, Robert Koch Institute, Berlin, Germany.
Maria B NowakowskaDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Finland.ORCID 0000-0003-2592-2442
Katja SelbyDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Finland.
François P DouillardDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Finland.
Martin B DornerBiological Toxins, Centre for Biological Threats and Special Pathogens, Robert Koch Institute, Berlin, Germany.
Kay PerryNE-CAT and Department of Chemistry and Chemical Biology, Argonne National Laboratory, Cornell University, IL, Argonne, USA.
Miia LindströmDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Finland.
Brigitte G DornerBiological Toxins, Centre for Biological Threats and Special Pathogens, Robert Koch Institute, Berlin, Germany.
Andreas RummelInstitute of Toxicology, Hannover Medical School, Germany.
Rongsheng JinDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.ORCID 0000-0003-0348-7363
University of California, Irvine · USUniversity of Helsinki · FIMedizinische Hochschule Hannover · DERobert Koch Institute · DEArgonne National Laboratory · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
Molecular mechanisms of botulinum neurotoxin neutralizationR01AI125704 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JIN, RONGSHENG, SHOEMAKER, CHARLES BIX · 2016 to 2020
$3.0M
Structural and functional studies of botulinum neurotoxinR01AI091823 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI JIN, RONGSHENG · 2012 to 2016
$2.0M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
NIAID NIH HHS R01 AI091823NIAID NIH HHS R01 AI125704NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527
6 · The paper itself

Abstract

Botulinum neurotoxins (BoNTs) are among the most lethal toxins known to humans, comprising seven established serotypes termed BoNT/A-G encoded in two types of gene clusters (ha and orfX) in BoNT-producing clostridia. The ha cluster encodes four non-toxic neurotoxin-associated proteins (NAPs) that assemble with BoNTs to protect and enhance their oral toxicity. However, the structure and function of the orfX-type NAPs remain largely unknown. Here, we report the crystal structures for OrfX1, OrfX2, and an OrfX1-OrfX3 complex, which are encoded in the orfX cluster of a BoNT/E1-producing Clostridium botulinum strain associated with human foodborne botulism. These structures lay the foundation for future studies on the potential roles of OrfX proteins in oral intoxication and pathogenesis of BoNTs.

Indexed as

Botulinum Toxins, Type AClostridium botulinumHumansMultigene FamilyBotulinum Toxins, Type Abacterial toxinbotulinum neurotoxinOrfX1OrfX2OrfX3orfX gene cluster

Identifiers

PMID36653893
PMCPMC10019085
OpenAlexW4317477413

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.