Evidence map›Paper›PMID 36653395›Full record

ArticleScientific reports2023

Ppe.CR.1 DNA test for predicting chilling requirement in peach.

Gizem Demirel, Alejandro Calle, John Mark Lawton, Omer Atagul, Wanfang Fu, Ksenija Gasic

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Gizem Demirel *Department of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA.
Alejandro Calle *Department of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA.
John Mark LawtonDepartment of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA.
Omer AtagulDepartment of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA.
Wanfang FuDepartment of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA.
Ksenija GasicDepartment of Plant and Environmental Sciences, Clemson University, Clemson, SC, 29634, USA. kgasic@clemson.edu.
Clemson University · USIsparta University of Applied Sciences · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chilling requirement (CR) is an important agronomic trait controlling the floral bud break for proper flowering in peach. Even though it has been widely researched and several peach CR quantitative trait loci (QTLs) have been identified, no diagnostic DNA tests validated in the U.S. peach breeding germplasm are available for this trait. Breeders and growers need a simple DNA test to predict the CR of peach cultivars for their particular environment. Therefore, we developed a quick and reliable Kompetitive Allele Specific PCR (KASP) DNA test using haplotype information from 9K IPSC genotype data of the U.S. peach germplasm integrating four CR-associated SNP markers from the previously reported CR QTL region on linkage group 1. Four KASP assays (Ppe.CR.1-1 to -4) were developed and validated on 77 peach cultivars, and nine accessions from two F

Indexed as

Prunus persicaDNAGenotypePhenotypePlant BreedingPolymorphism, Single NucleotideQuantitative Trait LociDNA

Identifiers

PMID36653395
PMCPMC9849201
OpenAlexW4317215105

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.