Evidence map›Paper›PMID 36652479›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Repurposing HDAC inhibitors to enhance ribonuclease 4 and 7 expression and reduce urinary tract infection.

Laura Schwartz, M Skye Bochter, Aaron Simoni, Kristin Bender, Juan de Dios Ruiz Rosado, Israel Cotzomi-Ortega, Yuriko I Sanchez-Zamora, Brian Becknell, Sarah Linn, Birong Li and 3 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  11. Intercalated cell function, kidney innate immunity, and urinary tract infections.Pflugers Archiv : European journal of physiology · 2024
    Review
  12. Article
  13. Uropathogen and host responses in pyelonephritis.Nature reviews. Nephrology · 2023
    Review
  14. Immune defenses in the urinary tract.Trends in immunology · 2023
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Laura SchwartzThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0002-4056-3030
M Skye BochterThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0001-9607-3770
Aaron SimoniThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0002-0657-3737
Kristin BenderThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0002-3051-3427
Juan de Dios Ruiz RosadoThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.
Israel Cotzomi-OrtegaThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.
Yuriko I Sanchez-ZamoraThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0002-0769-8523
Brian BecknellThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.
Sarah LinnThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0003-4337-2966
Birong LiThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0001-9214-3890
Nicholas SantoroLife Sciences Institute, University of Michigan, Ann Arbor 48109, MI.
Tad EichlerThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.
John David SpencerThe Kidney and Urinary Tract Center, The Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus 43205, OH.ORCID 0000-0001-5509-7135
Nationwide Children's Hospital · USUniversity of Michigan · US

Funding

The Contributions of Ribonuclease 4 & 7 to Urinary Tract Antibacterial DefenseR01DK115737 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI John David Spencer · 2018 to 2026
$2.8M
Insulin Signaling Activates Urothelial Defenses to Reduce Urinary Tract Infection SusceptibilityR01DK128088 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI SPENCER, JOHN DAVID · 2021 to 2025
$2.6M
Novel roles for urothelium during urinary tract obstructionR01DK125469 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI BECKNELL, BRIAN · 2020 to 2024
$2.1M
Linking Insulin Signaling to Antimicrobial Peptide Production and the Kidney's Antibacterial DefensesR01DK114035 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI SPENCER, JOHN DAVID · 2018 to 2021
$1.4M
Contrasting roles for neutrophils and macrophages during acute pyelonephritisK01DK128379 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI RUIZ ROSADO, JUAN DE DIOS · 2021 to 2025
$719k
Roles and Regulation of Ribonuclease 6 in Defending the Urinary Tract Against Bacterial InfectionR03DK118306 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI BECKNELL, BRIAN · 2018 to 2019
$228k
NIDDK NIH HHS K01 DK128379NIDDK NIH HHS R01 DK114035NIDDK NIH HHS R01 DK115737NIDDK NIH HHS R01 DK125469NIDDK NIH HHS R01 DK128088NIDDK NIH HHS R03 DK118306
6 · The paper itself

Abstract

With the emergence of antibiotic-resistant bacteria, innovative approaches are needed for the treatment of urinary tract infections. Boosting antimicrobial peptide expression may provide an alternative to antibiotics. Here, we developed reporter cell lines and performed a high-throughput screen of clinically used drugs to identify compounds that boost ribonuclease 4 and 7 expression (RNase 4 and 7), peptides that have antimicrobial activity against antibiotic-resistant uropathogens. This screen identified histone deacetylase (HDAC) inhibitors as effective RNase 4 and RNase 7 inducers. Validation studies in primary human kidney and bladder cells confirmed pan-HDAC inhibitors as well as the HDAC class I inhibitor, MS-275, induce RNase 4 and RNase 7 to protect human kidney and bladder cells from uropathogenic

Indexed as

Histone Deacetylase InhibitorsUrinary Tract InfectionsAnimalsAnti-Bacterial AgentsBenzamidesDrug RepositioningEscherichia coliHumansMicePyridinesRibonucleasesAnti-Bacterial AgentsBenzamidesentinostatHistone Deacetylase InhibitorsPyridinesribonuclease 4Ribonuclease 7Ribonucleasesantimicrobial peptidesdrug repurposinghistone deacetylase inhibitorsribonuclease 4 and 7urinary tract infection

Identifiers

PMID36652479
PMCPMC9942862
OpenAlexW4317360655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.