Evidence map›Paper›PMID 36651501›Full record

ArticleJournal of experimental botany2023

Mutation of DEFECTIVE EMBRYO SAC1 results in a low seed-setting rate in rice by regulating embryo sac development.

Xia Hu, Ping Yu, Yingxin Zhang, Zhiqiang Gao, Bin Sun, Weixun Wu, Chenwei Deng, Adil Abbas, Yongbo Hong, Lianping Sun and 6 more

Open access · hybridFull text read
In one paragraph

Article in Journal of experimental botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

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  7. Abnormal Degraded Tapetum 1 (ADT1) is required for tapetal cell death and pollen development in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Xia HuChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Ping YuChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Yingxin ZhangChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Zhiqiang GaoGannan Normal University, Ganzhou, Jiangxi, 341000, China.
Bin SunShanghai Academy of Agricultural Sciences, Shanghai, 201403, China.
Weixun WuChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Chenwei DengZhoukou Academy of Agricultural Sciences, Zhoukou, Henan, 466001, China.
Adil AbbasChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Yongbo HongChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Lianping SunChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Qunen LiuChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Pao XueChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Beifang WangChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Xiaodeng ZhanChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.
Liyong CaoChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.ORCID 0000-0002-0996-600X
Shihua ChengChina National Rice Research Institute, Hangzhou, Zhejiang, 311400, China.ORCID 0000-0001-8008-3907
China National Rice Research Institute · CNGannan Normal University · CNShanghai Academy of Agricultural Sciences · CNZhoukou City Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The seed-setting rate has a significant effect on grain yield in rice (Oryza sativa L.). Embryo sac development is essential for seed setting; however, the molecular mechanism underlying this process remains unclear. Here, we isolated defective embryo sac1 (des1), a rice mutant with a low seed-setting rate. Cytological examination showed degenerated embryo sacs and reduced fertilization capacity in des1. Map-based cloning revealed a nonsense mutation in OsDES1, a gene that encodes a putative nuclear envelope membrane protein (NEMP)-domain-containing protein that is preferentially expressed in pistils. The OsDES1 mutation disrupts the normal formation of functional megaspores, which ultimately results in a degenerated embryo sac in des1. Reciprocal crosses showed that fertilization is abnormal and that the female reproductive organ is defective in des1. OsDES1 interacts with LONELY GUY (LOG), a cytokinin-activating enzyme that acts in the final step of cytokinin synthesis; mutation of LOG led to defective female reproductive organ development. These results demonstrate that OsDES1 functions in determining the rice seed-setting rate by regulating embryo sac development and fertilization. Our study sheds light on the function of NEMP-type proteins in rice reproductive development.

Indexed as

OryzaEdible GrainGene Expression Regulation, PlantMembrane ProteinsMutationPlant ProteinsSeedsMembrane ProteinsPlant ProteinsEmbryo sacfemale sterilefertilizationOsDES1riceseed-setting rate

Identifiers

PMID36651501
PMCPMC10010608
OpenAlexW4317209706

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read89
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.