Evidence map›Paper›PMID 36650505›Full record

ArticleVirology journal2023

Development of an assay system for the analysis of host RISC activity in the presence of a potyvirus RNA silencing suppressor, HC-Pro.

Syuan-Fei Hong, Ru-Ying Fang, Wei-Lun Wei, Supidcha Jirawitchalert, Zhao-Jun Pan, Yu-Ling Hung, Thanh Ha Pham, Yen-Hsin Chiu, Tang-Long Shen, Chien-Kang Huang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Role of Plant Virus Movement Proteins in Suppression of Host RNAi Defense.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Syuan-Fei Hong *Institute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Ru-Ying Fang *Institute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Wei-Lun WeiInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Supidcha JirawitchalertInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Zhao-Jun PanInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Yu-Ling HungInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Thanh Ha PhamInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Yen-Hsin ChiuInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan.
Tang-Long ShenDepartment of Plant Pathology and Microbiology, National Taiwan University, Taipei, 106, Taiwan.
Chien-Kang HuangDepartment of Computer Science and Information Engineering, National Taiwan University, Taipei, 106, Taiwan. ckhuang@ntu.edu.tw.
Shih-Shun LinInstitute of Biotechnology, National Taiwan University, Taipei, 106, Taiwan. linss01@ntu.edu.tw.
National Taiwan University · TWAgricultural Biotechnology Research Center, Academia Sinica · TWCouncil of Agriculture · TWNational Taipei University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTo investigate the mechanism of RNA silencing suppression, the genetic transformation of viral suppressors of RNA silencing (VSRs) in Arabidopsis integrates ectopic VSR expression at steady state, which overcomes the VSR variations caused by different virus infections or limitations of host range. Moreover, identifying the insertion of the transgenic VSR gene is necessary to establish a model transgenic plant for the functional study of VSR.

methodsDeveloping an endogenous AGO1-based in vitro RNA-inducing silencing complex (RISC) assay prompts further investigation into VSR-mediated suppression. Three P1/HC-Pro plants from turnip mosaic virus (TuMV) (P1/HC-Pro

resultsOur results indicated that the P1/HC-Pro

conclusionsIn this study, we demonstrated the application of various plant materials in an in vitro RISC assay of VSR-mediated RNA silencing suppression.

Indexed as

ArabidopsisPotyvirusCysteine EndopeptidasesNicotianaPlant DiseasesRNA InterferenceViral ProteinsCysteine EndopeptidasesHC-Pro protein, potyvirusViral ProteinsAGO1 degradationHC-proIn vitro RISC assayT-DNA insertion

Identifiers

PMID36650505
PMCPMC9844029
OpenAlexW4316810598

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.