Evidence map›Paper›PMID 36650452›Full record

ArticleBMC genomics2023

Molecular and physiological mechanisms of tea (Camellia sinensis (L.) O. Kuntze) leaf and root in response to nitrogen deficiency.

Zheng-He Lin, Chang-Song Chen, Shui-Qing Zhao, Yuan Liu, Qiu-Sheng Zhong, Qi-Chun Ruan, Zhi-Hui Chen, Xiao-Mei You, Rui-Yang Shan, Xin-Lei Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  7. Strong Invasive Mechanism ofPlants (Basel, Switzerland) · 2024
    Article
  8. Nitrogen transport and assimilation in tea plant (Frontiers in plant science · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Zheng-He Lin *Tea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China. linzhenghe@126.com.
Chang-Song Chen *Tea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China. ccs6536597@163.com.
Shui-Qing ZhaoLaixi Bureau of Agriculture and Rural Affairs of Shandong Province, Laixi, 266699, China.
Yuan LiuLaixi Bureau of Agriculture and Rural Affairs of Shandong Province, Laixi, 266699, China.
Qiu-Sheng ZhongTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Qi-Chun RuanTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Zhi-Hui ChenTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Xiao-Mei YouTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Rui-Yang ShanTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Xin-Lei LiTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Ya-Zhen ZhangTea Research Institute, Fujian Academy of Agricultural Sciences, Fu'an, 355000, China.
Tea Research Institute · CNFujian Academy of Agricultural Sciences · CN

Funding

Basic Scientific Research Funds of Public Welfare Scientific Research Institutes of Fujian Province 2020R1029002Collaborative innovation Project XTCXGC2021004Earmarked Fund for China Agriculture Research System CARS-19National Natural Science Foundation of China 31570690Natural Science Foundation of Fujian Province 2020J011365
6 · The paper itself

Abstract

backgroundAs an economically important crop, tea is strongly nitrogen (N)-dependent. However, the physiological and molecular mechanisms underlying the response of N deficiency in tea are not fully understood. Tea cultivar "Chunlv2" [Camellia sinensis (L.) O. Kuntze] were cultured with a nutrient solution with 0 mM [N-deficiency] or 3 mM (Control) NH

resultsN deficiency significantly decreased N content, dry weight, chlorophyll (Chl) content, L-theanine and the activities of N metabolism-related enzymes, but increased the content of total flavonoids and polyphenols in tea leaves. N deficiency delayed the sprouting time of tea buds. By using the RNA-seq technique and subsequent bioinformatics analysis, 3050 up-regulated and 2688 down-regulated differentially expressed genes (DEGs) were isolated in tea leaves in response to N deficiency. However, only 1025 genes were up-regulated and 744 down-regulated in roots. Gene ontology (GO) term enrichment analysis showed that 205 DEGs in tea leaves were enriched in seven GO terms and 152 DEGs in tea roots were enriched in 11 GO items based on P < 0.05. In tea leaves, most GO-enriched DEGs were involved in chlorophyll a/b binding activities, photosynthetic performance, and transport activities. But most of the DEGs in tea roots were involved in the metabolism of carbohydrates and plant hormones with regard to the GO terms of biological processes. N deficiency significantly increased the expression level of phosphate transporter genes, which indicated that N deficiency might impair phosphorus metabolism in tea leaves. Furthermore, some DEGs, such as probable anion transporter 3 and high-affinity nitrate transporter 2.7, might be of great potential in improving the tolerance of N deficiency in tea plants and further study could work on this area in the future.

conclusionsOur results indicated N deficiency inhibited the growth of tea plant, which might be due to altered N metabolism and expression levels of DEGs involved in the photosynthetic performance, transport activity and oxidation-reduction processes.

Indexed as

Camellia sinensisChlorophyll AGene Expression Regulation, PlantNitrogenPlant LeavesPlant ProteinsTeaChlorophyll ANitrogenPlant ProteinsTeaNitrogen deficiencyNitrogen metabolismTeaTranscriptome profile

Identifiers

PMID36650452
PMCPMC9847173
OpenAlexW4316814870

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.