Evidence map›Paper›PMID 36650342›Full record

ArticleBiotechnology letters2023

Establishment of a visual gene knockout system based on CRISPR/Cas9 for the rare actinomycete Nonomuraea gerenzanensis.

Li Tian, Bingyu Yan, Dandan Huo, Wenhui Sun, Sufang Cui, Xiaojing Li, Xiangmei Zhang, Huijun Dong

Abstract read
PubMed Publisher
In one paragraph

Article in Biotechnology letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Li Tian *School of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Bingyu Yan *School of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Dandan HuoSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Wenhui SunSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Sufang CuiSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Xiaojing LiSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Xiangmei ZhangSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China.
Huijun DongSchool of Pharmaceutical Sciences, Liaocheng University, No.1 Hunan Road, Dongchangfu District, Liaocheng, 252000, China. donghuijun_747@163.com.ORCID http://orcid.org/0000-0002-6899-879X

Funding

National Natural Science Foundation of China 81903504Postdoctoral Science Foundation of China 2019M662376
6 · The paper itself

Abstract

objectivesTo develop a modified CRISPR/Cas9 system with the β-glucuronidase (GusA) reporter and a dual sgRNA cassette for Nonomuraea gerenzanensis (N. gerenzanensis).

resultsWith the aid of a visual GusA reporter, the complicated and tedious process of cloning and gene identification could be abandoned entirely in the genetic editing of N. gerenzanensis. Moreover, introducing a dual sgRNA cassette into the CRISPR/Cas9 system significantly improved gene deletion efficiency compared to the single sgRNA element. Furthermore, the length of the homologous flanking sequences set to the lowest value of 500 bp in this system could still reach the relatively higher conjugation transfer frequency.

conclusionsThe enhanced CRISPR/Cas9 system could efficiently perform genetic manipulation on the rare actinomycete N. gerenzanensis.

Indexed as

ActinobacteriaCRISPR-Cas SystemsGene EditingGene Knockout TechniquesA40926CRISPR/Cas9N. gerenzanensisβ-Glucuronidase

Identifiers

PMID36650342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.