Evidence map›Paper›PMID 36650274›Full record

ArticleThe ISME journal2023

Evolution of snow algae, from cosmopolitans to endemics, revealed by DNA analysis of ancient ice.

Takahiro Segawa, Takahiro Yonezawa, Ryo Matsuzaki, Hiroshi Mori, Ayumi Akiyoshi, Francisco Navarro, Koji Fujita, Vladimir B Aizen, Zhongqin Li, Shuhei Mano and 1 more

Open access · hybridFull text read
In one paragraph

Article in The ISME journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 11 institutions in 4 countries.

Takahiro SegawaCenter for Life Science Research, University of Yamanashi, Yamanashi, Japan. tsegawa@yamanashi.ac.jp.ORCID 0000-0002-3111-708X
Takahiro YonezawaDepartment of Animal Science, Faculty of Agriculture, Tokyo University of Agriculture, Kanagawa, Japan. ty205685@nodai.ac.jp.
Ryo MatsuzakiFaculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, Japan.
Hiroshi MoriAdvanced Genomics Center, National Institute of Genetics, Shizuoka, Japan.ORCID 0000-0003-0806-7704
Ayumi AkiyoshiNational Institute of Polar Research, Tokyo, Japan.
Francisco NavarroDepartamento de Matemática Aplicada a las Tecnologías de la Información y las Comunicaciones, ETSI de Telecomunicación, Universidad Politécnica de Madrid, Madrid, Spain.
Koji FujitaGraduate School of Environmental Studies, Nagoya University, Aichi, Japan.
Vladimir B AizenDepartment of Earth and Space Science, University of Idaho, Moscow, Idaho, USA.
Zhongqin LiLaboratory of Cryospheric Sciences, Northwest Institute of Eco-Environment and National Resources/Tianshan Glaciological Station, Chinese Academy of Sciences, Gansu, China.
Shuhei ManoThe Institute of Statistical Mathematics, Tokyo, Japan.
Nozomu TakeuchiDepartment of Earth Sciences, Graduate School of Science, Chiba University, Chiba, Japan.ORCID 0000-0002-3267-5534
Chiba University · JPChinese Academy of Sciences · CNNagoya University · JPNational Institute of Genetics · JPNational Institute of Polar Research · JPThe Institute of Statistical Mathematics · JPTokyo University of Agriculture · JPUniversidad Politécnica de Madrid · ESUniversity of Idaho · USUniversity of Tsukuba · JPUniversity of Yamanashi · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent studies of microbial biogeography have revealed the global distribution of cosmopolitans and dispersal of regional endemics, but little is known about how these processes are affected by microbial evolution. Here, we compared DNA sequences from snow/glacier algae found in an 8000-year-old ice from a glacier in central Asia with those from modern snow samples collected at 34 snow samples from globally distributed sites at the poles and mid-latitudes, to determine the evolutionary relationship between cosmopolitan and endemic phylotypes of snow algae. We further applied a coalescent theory-based demographic model to the DNA sequences. We found that the genus Raphidonema (Trebouxiophyceae) was distributed over both poles and mid-latitude regions and was detected in different ice core layers, corresponding to distinct time periods. Our results indicate that the modern cosmopolitan phylotypes belonging to Raphidonema were persistently present long before the last glacial period. Furthermore, endemic phylotypes originated from ancestral cosmopolitan phylotypes, suggesting that modern regional diversity of snow algae in the cryosphere is a product of microevolution. These findings suggest that the cosmopolitans dispersed across the world and then derived new localized endemics, which thus improves our understanding of microbial community formation by microevolution in natural environments.

Indexed as

ChlorophytaDNAIce CoverDNA

Identifiers

PMID36650274
PMCPMC10030584
OpenAlexW4316814952

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read63
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.