Evidence map›Paper›PMID 36650149›Full record

ArticleScientific data2023

Genome sequencing and assembly of Lathyrus sativus - a nutrient-rich hardy legume crop.

Sivasubramanian Rajarammohan, Lovenpreet Kaur, Anjali Verma, Dalwinder Singh, Shrikant Mantri, Joy K Roy, Tilak Raj Sharma, Ashwani Pareek, Pramod Kaitheri Kandoth

Abstract readDataset
In one paragraph

Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. WildPlants (Basel, Switzerland) · 2024
    Review
  4. Article
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sivasubramanian RajarammohanNational Agri-Food Biotechnology Institute, Mohali, 140306, India.ORCID 0000-0002-4686-8361
Lovenpreet KaurNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Anjali VermaNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Dalwinder SinghNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Shrikant MantriNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Joy K RoyNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Tilak Raj SharmaNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Ashwani PareekNational Agri-Food Biotechnology Institute, Mohali, 140306, India.
Pramod Kaitheri KandothNational Agri-Food Biotechnology Institute, Mohali, 140306, India. pramod@nabi.res.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grass pea (Lathyrus sativus) is a cool-season legume crop tolerant to drought, salinity, waterlogging, insects, and other biotic stresses. Despite these beneficial traits, this crop is not cultivated widely due to the accumulation of a neurotoxin - β-N-oxalyl-L-α, β-diaminopropionic acid (β-ODAP) in the seeds and its association with neurolathyrism. In this study, we sequenced and assembled the genome of Lathyrus sativus cultivar Pusa-24, an elite Indian cultivar extensively used in breeding programs. The assembled genome of Lathyrus was 3.80 Gb in length, with a scaffold N50 of 421.39 Mb. BUSCO assessment indicated that 98.3% of highly conserved Viridiplantae genes were present in the assembly. A total of 3.17 Gb (83.31%) of repetitive sequences and 50,106 protein-coding genes were identified in the Lathyrus assembly. The Lathyrus genome assembly reported here thus provides a much-needed and robust foundation for various genetic and genomic studies in this vital legume crop.

Indexed as

Amino Acids, DiaminoLathyrusFabaceaeGenome, PlantPlant BreedingSeedsAmino Acids, Diamino

Identifiers

PMID36650149
PMCPMC9845207

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.