Evidence map›Paper›PMID 36649009›Full record

ArticlePathophysiology : the official journal of the International Society for Pathophysiology2023

LMP1-EBV Gene Deletion Mutations and HLA Genotypes of Nasopharyngeal Cancer Patients in Vietnam.

Cua Thi Hong Trinh, Dung Ngoc Tran, Linh Thi Thao Nguyen, Nghia Tin Tran, Minh Trinh Gia Nguyen, Vy Tran Phuong Nguyen, Nhung Thi Hong Vu, Khanh Duy Dang, Kha Van Vo, Hoa Chieu Chau and 2 more

Erratum issuedAbstract read
In one paragraph

Article in Pathophysiology : the official journal of the International Society for Pathophysiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Correction: Trinh et al. LMP1-EBV Gene Deletion Mutations and HLA Genotypes of Nasopharyngeal Cancer Patients in Vietnam.Pathophysiology : the official journal of the International Society for Pathophysiology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Cua Thi Hong TrinhDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Dung Ngoc TranDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Linh Thi Thao NguyenDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Nghia Tin TranDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.ORCID 0000-0003-1485-2813
Minh Trinh Gia NguyenDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Vy Tran Phuong NguyenDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Nhung Thi Hong VuDepartment of Pathophysiology and Immunology, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Khanh Duy DangDepartment of Pharmacology and Clinical Pharmacy, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.
Kha Van VoCan Tho Oncology Hospital, Can Tho 900000, Vietnam.
Hoa Chieu ChauCan Tho Ear Nose Throat Hospital, Can Tho 900000, Vietnam.
Phi Thi Phi PhanDepartment of Physiopathology & Immunology, Ha Noi Medical University, Ha Noi 100000, Vietnam.
Mai Huynh Truc PhuongFaculty of Medicine, Can Tho University of Medicine and Pharmacy, Can Tho 900000, Vietnam.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nasopharyngeal carcinoma (NPC) is the most common cancer among head and neck cancers in Vietnam. We aimed to identify the rate of a 30 bp deletion mutation of the LMP1-EBV gene in nasopharyngeal biopsy tissue samples, the HLA genotypes of NPC patients, and the relationship between these two targets. Patients with NPC at Can Tho Oncology Hospital from September 2014 to December 2018 were selected. A length of 30 bp of the del-LMP1-EBV gene was analyzed using a PCR technique, and the HLA genotypes in patients' blood samples were analyzed with PCR-SSO technology. HLA-B*15 gene carriers had the highest risk of 30 bp LMP1-EBV gene deletion mutation, which was found in 51 out of 70 patients (72.9%). Carriers of the HLA-B*15 allele had a 4.6-fold increased risk of a 30 bp del-LMP1-EBV gene compared with non-carriers of this allele. The initial identification of NPC was related to the 30 bp del-LMP1-EBV gene and high frequencies of the -A*02, -B*15, -DRB1*12, -DQB1*03, and -DQA1*01 HLA alleles. Our study results suggest an association of the 30 bp del-LMP1-EBV gene and the HLA-B*15 allele with NPC susceptibility.

Indexed as

HLA genotypeLMP1-EBV genenasopharyngeal carcinoma

Identifiers

PMID36649009
PMCPMC9844464

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.