Evidence map›Paper›PMID 36645307›Full record

ArticlemBio2023

Endogenous Reverse Transcriptase Inhibition Attenuates TLR5-Mediated Inflammation.

Nicholas Dopkins, Bhavya Singh, Stephanie Michael, Morgan M O'Mara, Jez L Marston, Tongyi Fei, Matthew L Bendall, Douglas F Nixon

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Approaches to repurposing reverse transcriptase antivirals in cancer.British journal of clinical pharmacology · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Nicholas DopkinsDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Bhavya SinghDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Stephanie MichaelDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Morgan M O'MaraDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Jez L MarstonDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Tongyi FeiDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Matthew L BendallDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.
Douglas F NixonDivision of Infectious Diseases, Department of Medicine, Weill Cornell Medicine, New York, New York, USA.ORCID 0000-0002-2801-1786
Cornell University · US

Funding

Regulatory Crosstalk Between Human Endogenous Retroviruses, HIV, and EBV, in LymphomaR01CA260691 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CESARMAN, ETHEL, NIXON, DOUGLAS F · 2021 to 2025
$5.8M
HIV induced anti-cancer HERV immunity in prostate, breast and colon cancersR01CA206488 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI NIXON, DOUGLAS F · 2016 to 2020
$2.2M
NCI NIH HHS R01 CA206488NCI NIH HHS R01 CA260691
6 · The paper itself

Abstract

Transposable elements (TEs) are mobile genomic sequences that encompass roughly 50% of the human genome. Class 1 TEs, or "retrotransposons," mobilize through the production of an RNA intermediate that is then reverse transcribed to form complementary DNA (cDNA) molecules capable of genomic reinsertion. While TEs are traditionally silenced to maintain genomic integrity, the recognition of immunostimulatory cues, such as those provided by microorganisms, drastically alters host transcription to induce the differential expression of TEs. Emerging evidence demonstrates that the inducible production of TE cDNA is not an inert phenomenon but instead has been coopted by host immunity to facilitate cross talk between host and constituents of the microbiota by agonizing intrinsic antiviral receptors. Here, we demonstrate that immunostimulation of toll-like receptor 4 (TLR4) with lipopolysaccharide (LPS) and TLR5 with bacterial flagella (FLA) alters the expression of retrotransposons, such as human endogenous retroviruses (HERVs) and long interspersed nuclear elements (LINEs). Next, we demonstrate that reverse transcriptase inhibitor (RTi) delivery ameliorates the acute production of the proinflammatory cytokine "tumor necrosis factor alpha" (TNF-α) in response to FLA in a monocytic cell line (THP-1). Collectively, our findings demonstrate that TLR5-mediated cross talk between the host and microbiota is partially dependent on the reverse transcription (RT) of retrotransposons.

Indexed as

Endogenous RetrovirusesToll-Like Receptor 5Antiviral AgentsDNA, ComplementaryHumansInflammationRetroelementsRNA-Directed DNA PolymeraseAntiviral AgentsDNA, ComplementaryRetroelementsRNA-Directed DNA PolymeraseToll-Like Receptor 5flagellahuman endogenous retrovirus (HERV)innate immunitylong interspersed nuclear element (LINE)toll-like receptors (TLRs)

Identifiers

PMID36645307
PMCPMC9973353
OpenAlexW4316662920

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.