Evidence map›Paper›PMID 36645292›Full record

ArticlemBio2023

DNA Methylation and RNA-DNA Hybrids Regulate the Single-Molecule Localization of a DNA Methyltransferase on the Bacterial Nucleoid.

Nicolas L Fernandez, Ziyuan Chen, David E H Fuller, Lieke A van Gijtenbeek, Taylor M Nye, Julie S Biteen, Lyle A Simmons

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. An experimental framework to assess biomolecular condensates in bacteria.bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nicolas L Fernandez *Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.
Ziyuan Chen *Department of Biophysics, University of Michigan, Ann Arbor, Michigan, USA.
David E H FullerDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan, USA.
Lieke A van GijtenbeekDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.
Taylor M NyeDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0003-4695-0485
Julie S BiteenDepartment of Biophysics, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0003-2038-6484
Lyle A SimmonsDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, Michigan, USA.ORCID 0000-0002-9600-7623
University of Michigan · US

Funding

Tools for Creating a Super-Resolution Interaction Map of Subcellular Dynamics in Living Bacteria CellsR21GM128022 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BITEEN, JULIE · 2018 to 2019
$408k
NIGMS NIH HHS R21 GM128022
6 · The paper itself

Abstract

Bacterial DNA methyltransferases (MTases) function in restriction modification systems, cell cycle control, and the regulation of gene expression. DnmA is a recently described DNA MTase that forms N6-methyladenosine at nonpalindromic 5'-GACG

Indexed as

BacteriophagesMethyltransferasesDNA, BacterialDNA MethylationDNA Restriction-Modification EnzymesRNADNA, BacterialDNA Restriction-Modification EnzymesMethyltransferasesRNABacillus subtilisepigeneticreplisomerestriction modificationsuperresolution microscopy

Identifiers

PMID36645292
PMCPMC9973331
OpenAlexW4316662962

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.