Evidence map›Paper›PMID 36644294›Full record

ArticleFaculty reviews2022

Solution of the protein structure prediction problem at last: crucial innovations and next frontiers.

David A Agard, Gregory R Bowman, William DeGrado, Nikolay V Dokholyan, Huan-Xiang Zhou

Abstract readComment
In one paragraph

Article in Faculty reviews, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Exploring the protein universe with distant similarity detection methods.Protein science : a publication of the Protein Society · 2026
    Review
  3. Journal of the American Chemical Society · 2025
    Article
  4. bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

David A AgardUniversity of California San Francisco; Chan Zuckerberg Institute for Advanced Biological Imaging.ORCID https://orcid.org/0000-0003-3512-695X
Gregory R BowmanUniversity of Pennsylvania.ORCID https://orcid.org/0000-0002-2083-4892
William DeGradoUniversity of California, San Francisco.ORCID https://orcid.org/0000-0003-4745-263X
Nikolay V DokholyanPenn State College of Medicine.ORCID https://orcid.org/0000-0002-8225-4025
Huan-Xiang ZhouUniversity of Illinois at Chicago.ORCID https://orcid.org/0000-0001-9020-0302

Funding

Quantitative, Mechanistic Studies of Biomolecular RecognitionR35GM118091 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Huan-Xiang Zhou · 2016 to 2026
$6.5M
Austrian Science Fund FWF DOC 50Austrian Science Fund FWF P 29432NIGMS NIH HHS R35 GM118091
6 · The paper itself

Abstract

The protein structure prediction problem is solved, at last, thanks in large part to the use of artificial intelligence. The structures predicted by AlphaFold and RoseTTAFold are becoming the requisite starting point for many protein scientists. New frontiers, such as the conformational sampling of intrinsically disordered proteins, are emerging.

Indexed as

AlphaFoldprotein structureRossTTAFoldthree-dimensional structure

Identifiers

PMID36644294
PMCPMC9815721

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.