Evidence map›Paper›PMID 36643624›Full record

ArticlePeerJ2023

Eight single nucleotide polymorphisms and their association with food habit domestication traits and growth traits in largemouth bass fry (

Jiao Cui, Zhou Jiang, Zerui Wang, Jiaqi Shao, Chuanju Dong, Lei Wang, Xuejun Li, Jinxing Du, Shengjie Li, Zhigang Qiao and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in PeerJ, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jiao CuiCollege of Fisheries, Henan Normal University, Xinxiang, China.
Zhou JiangCollege of Fisheries, Henan Normal University, Xinxiang, China.
Zerui WangCollege of Fisheries, Henan Normal University, Xinxiang, China.
Jiaqi ShaoCollege of Fisheries, Henan Normal University, Xinxiang, China.
Chuanju DongCollege of Fisheries, Henan Normal University, Xinxiang, China.
Lei WangCollege of Fisheries, Henan Normal University, Xinxiang, China.
Xuejun LiCollege of Fisheries, Henan Normal University, Xinxiang, China.
Jinxing DuPearl River Fisheries Research Institute, Chinese Academy of Fisheries Sciences, Key Laboratory of Tropical and Subtropical Fishery Resource Application and Cultivation, China Ministry of Agriculture, Guangzhou, China.
Shengjie LiCollege of Fisheries, Henan Normal University, Xinxiang, China.
Zhigang QiaoCollege of Fisheries, Henan Normal University, Xinxiang, China.
Meng ZhangCollege of Fisheries, Henan Normal University, Xinxiang, China.ORCID 0000-0002-7918-0811
Henan Normal University · CNChinese Academy of Fishery Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The largemouth bass ( Methods: To identify single nucleotide polymorphisms (SNPs) related to food habit domestication traits and growth traits in largemouth bass fry, we initially genotyped fry using eight candidate SNPs based on polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method, with genetic parameters being determined using Popgen32 and Cervus 3.0. Subsequently, we assessed the associations between food habit domestication traits of largemouth bass fry and these SNPs using the Chi-square test or Fisher's exact test. Furthermore, we used a general linear model to assess the relationships between the growth traits of largemouth bass fry and these SNPs. The Pearson correlation coefficient between growth traits and the SNPs was also determined using bivariate correlation analysis in IBM SPSS Statistics 22. Finally, the phenotypic variation explained (PVE) by the SNPs was calculated by regression analysis in Microsoft Excel. Results: The genotyping results obtained based on PCR-RFLP analysis were consistent with those of direct sequencing. Five SNPs (SNP01, SNP02, SNP04, SNP05, and SNP06) were found to be significantly correlated with the food habit domestication traits of fry ( Conclusions: Our findings indicated that the PCR-RFLP can be used as a low-cost genotyping method to identify SNPs related to food habit domestication and growth traits in largemouth bass, and that these trait-related SNPs might provide a molecular basis for the future breeding of new varieties of largemouth bass.

Indexed as

BassAnimalsDomesticationPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthPolymorphism, Single NucleotideFood habit domestication traitsGrowth traitsMicropterus salmoidesPolymerase chain reaction-restriction fragment length polymorphismSingle nucleotide polymorphism

Identifiers

PMID36643624
PMCPMC9835702
OpenAlexW4313824663

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.