Evidence map›Paper›PMID 36642771›Full record

ArticleAntonie van Leeuwenhoek2023

Genomic plasticity and adaptive capacity of the quaternary alkyl-ammonium compound and copper tolerant Acinetobacter bohemicus strain QAC-21b isolated from pig manure.

Dipen Pulami, Lina Schwabe, Jochen Blom, Oliver Schwengers, Gottfried Wilharm, Peter Kämpfer, Stefanie P Glaeser

Open access · hybridFull text read
In one paragraph

Article in Antonie van Leeuwenhoek, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 69% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Dipen PulamiInstitute of Applied Microbiology, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Lina SchwabeInstitute of Applied Microbiology, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Jochen BlomBioinformatics and Systems Biology, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Oliver SchwengersBioinformatics and Systems Biology, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Gottfried WilharmProject Group P2, Robert Koch Institute, Wernigerode Branch, 38855, Wernigerode, Germany.
Peter KämpferInstitute of Applied Microbiology, Justus-Liebig University Giessen, 35392, Giessen, Germany.
Stefanie P GlaeserInstitute of Applied Microbiology, Justus-Liebig University Giessen, 35392, Giessen, Germany. Stefanie.Glaeser@umwelt.uni-giessen.de.
University of Giessen · DERobert Koch Institute · DE

Funding

Bundesministerium für Bildung und Forschung 01KI1733Deutsche Forschungsgemeinschaft GL 900/1-1Justus Liebig Universität Gießen PhD Grand
6 · The paper itself

Abstract

Here, we present the genomic characterization of an Acinetobacter bohemicus strain QAC-21b which was isolated in the presence of a quaternary alky-ammonium compound (QAAC) from manure of a conventional German pig farm. The genetic determinants for QAAC, heavy metal and antibiotic resistances are reported based of the whole genome shotgun sequence and physiological growth tests. A. bohemicus QAC-21b grew in a species typical manner well at environmental temperatures but not at 37 °C. The strain showed tolerance to QAACs and copper but was susceptible to antibiotics relevant for Acinetobacter treatments. The genome of QAC-21b contained several Acinetobacter typical QAAC and heavy metal transporting efflux pumps coding genes, but no key genes for acquired antimicrobial resistances. The high genomic content of transferable genetic elements indicates that this bacterium can be involved in the transmission of antimicrobial resistances, if it is released with manure as organic fertilizer on agricultural fields. The genetic content of the strain was compared to that of two other A. bohemicus strains, the type strain ANC 3994

Indexed as

AcinetobacterMetals, HeavyAnimalsAnti-Bacterial AgentsCopperGenomicsManureQuaternary Ammonium CompoundsSoilSwineAnti-Bacterial AgentsCopperManureMetals, HeavyQuaternary Ammonium CompoundsSoilAcinetobacter bohemicusEnvironmental transmissionManureQAAC tolerance

Identifiers

PMID36642771
PMCPMC10024671
OpenAlexW4316345212

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read69
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.