Evidence map›Paper›PMID 36640924›Full record

ArticleMolecular & cellular proteomics : MCP2023

TEAD Proteins Associate With DNA Repair Proteins to Facilitate Cellular Recovery From DNA Damage.

Philamer C Calses, Victoria C Pham, Alissa D Guarnaccia, Meena Choi, Erik Verschueren, Sietske T Bakker, Trang H Pham, Trent Hinkle, Chad Liu, Matthew T Chang and 11 more

Open access · goldAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. TEAD-targeting small molecules induce a cofactor switch to regulate the Hippo pathway.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 6 institutions in 4 countries.

Philamer C CalsesDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Victoria C PhamDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Alissa D GuarnacciaDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Meena ChoiDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Erik VerschuerenDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Sietske T BakkerUCSF Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, California, USA.
Trang H PhamDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA.
Trent HinkleDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Chad LiuDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA.
Matthew T ChangDepartment of Bioinformatics, Genentech Inc, South San Francisco, California, USA.
Noelyn KljavinDepartment of Molecular Oncology, Genentech Inc, South San Francisco, California, USA.
Corey BakalarskiDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA.
Benjamin HaleyDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA.
Jianing ZouDepartment of Biology, Research Service Division, WuXi AppTec, Shanghai, China.
Cuicui YanDepartment of Biology, Research Service Division, WuXi AppTec, Shanghai, China.
Xia SongDepartment of Biology, Research Service Division, WuXi AppTec, Shanghai, China.
Xiaoyan LinDepartment of Biology, Research Service Division, WuXi AppTec, Shanghai, China.
Rebecca RowntreeDepartment of Molecular Oncology, Genentech Inc, South San Francisco, California, USA.
Alan AshworthUCSF Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, California, USA.
Anwesha DeyDepartments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA. Electronic address: anweshad@gene.com.
Jennie R LillDepartment of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA. Electronic address: jlill@gene.com.
WuXi AppTec (China) · CNMolecular Oncology (United States) · USSunesis (United States) · USUniversity of California, San Francisco · USAgenzia Regionale per la Protezione dell'ambiente ligure · ITGene Therapy Laboratory · FR

Funding

Translational InformaticsP30CA082103 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Kate Taylor Shumate · 1999 to 2026
$209.7M
NCI NIH HHS P30 CA082103
6 · The paper itself

Abstract

Transcriptional enhanced associate domain family members 1 to 4 (TEADs) are a family of four transcription factors and the major transcriptional effectors of the Hippo pathway. In order to activate transcription, TEADs rely on interactions with other proteins, such as the transcriptional effectors Yes-associated protein and transcriptional co-activator with PDZ-binding motif. Nuclear protein interactions involving TEADs influence the transcriptional regulation of genes involved in cell growth, tissue homeostasis, and tumorigenesis. Clearly, protein interactions for TEADs are functionally important, but the full repertoire of TEAD interaction partners remains unknown. Here, we employed an affinity purification mass spectrometry approach to identify nuclear interacting partners of TEADs. We performed affinity purification mass spectrometry experiment in parallel in two different cell types and compared a wildtype TEAD bait protein to a nuclear localization sequence mutant that does not localize to the nucleus. We quantified the results using SAINT analysis and found a significant enrichment of proteins linked to DNA damage including X-ray repair cross-complementing protein 5 (XRCC5), X-ray repair cross-complementing protein 6 (XRCC6), poly(ADP-ribose) polymerase 1 (PARP1), and Rap1-interacting factor 1 (RIF1). In cellular assays, we found that TEADs co-localize with DNA damage-induced nuclear foci marked by histone H2AX phosphorylated on S139 (γH2AX) and Rap1-interacting factor 1. We also found that depletion of TEAD proteins makes cells more susceptible to DNA damage by various agents and that depletion of TEADs promotes genomic instability. Additionally, depleting TEADs dampens the efficiency of DNA double-stranded break repair in reporter assays. Our results connect TEADs to DNA damage response processes, positioning DNA damage as an important avenue for further research of TEAD proteins.

Indexed as

DNA DamageDNA RepairTEA Domain Transcription FactorsCarcinogenesisDNA-Binding ProteinsHumansTranscription FactorsDNA-Binding ProteinsTEAD1 protein, humanTEA Domain Transcription FactorsTranscription FactorsAP-MSDNA damageHippo pathwayTEADtranscription

Identifiers

PMID36640924
PMCPMC9947421
OpenAlexW4315618948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.