Evidence map›Paper›PMID 36639707›Full record

ArticleScientific reports2023

Microbial diversity and proxy species for human impact in Italian karst caves.

Federico Biagioli, Claudia Coleine, Elena Piano, Giuseppe Nicolosi, Anna Poli, Valeria Prigione, Andrea Zanellati, Cristina Varese, Marco Isaia, Laura Selbmann

Abstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  4. IMA fungus · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Federico BiagioliDepartment of Ecological and Biological Sciences, University of Tuscia, 01100, Viterbo, Italy.
Claudia ColeineDepartment of Ecological and Biological Sciences, University of Tuscia, 01100, Viterbo, Italy. coleine@unitus.it.
Elena PianoDepartment of Life Sciences and System Biology, University of Torino, 10123, Turin, Italy.
Giuseppe NicolosiDepartment of Life Sciences and System Biology, University of Torino, 10123, Turin, Italy.
Anna PoliDepartment of Life Sciences and System Biology, Mycotheca Universitatis Taurinensis, University of Torino, 10125, Turin, Italy.
Valeria PrigioneDepartment of Life Sciences and System Biology, Mycotheca Universitatis Taurinensis, University of Torino, 10125, Turin, Italy.
Andrea ZanellatiDepartment of Life Sciences and System Biology, Mycotheca Universitatis Taurinensis, University of Torino, 10125, Turin, Italy.
Cristina VareseDepartment of Life Sciences and System Biology, Mycotheca Universitatis Taurinensis, University of Torino, 10125, Turin, Italy.
Marco IsaiaDepartment of Life Sciences and System Biology, University of Torino, 10123, Turin, Italy.
Laura SelbmannDepartment of Ecological and Biological Sciences, University of Tuscia, 01100, Viterbo, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, the highly adapted cave microbial communities are challenged by the expanding anthropization of these subterranean habitats. Although recent advances in characterizing show-caves microbiome composition and functionality, the anthropic effect on promoting the establishment, or reducing the presence of specific microbial guilds has never been studied in detail. This work aims to investigate the whole microbiome (Fungi, Algae, Bacteria and Archaea) of four Italian show-caves, displaying different environmental and geo-morphological conditions and one recently discovered natural cave to highlight potential human-induced microbial traits alterations. Results indicate how show-caves share common microbial traits in contrast to the natural one; the first are characterized by microorganisms related to outdoor environment and/or capable of exploiting extra inputs of organic matter eventually supplied by tourist flows (i.e. Chaetomium and Phoma for fungi and Pseudomonas for bacteria). Yet, variation in microalgae assemblage composition was reported in show-caves, probably related to the effect of the artificial lighting. This study provides insights into the potential microbiome cave contamination by human-related bacteria (e.g. Lactobacillus and Staphylococcus) and commensal/opportunistic human associated fungi (e.g. Candida) and dermatophytes. This work is critical to untangle caves microbiome towards management and conservation of these fragile ecosystems.

Indexed as

CavesMicrobiotaAnthropogenic EffectsArchaeaBacteriaFungiHumans

Identifiers

PMID36639707
PMCPMC9839721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.