ArticleGenome research2023
A chromosome-scale epigenetic map of the
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Article in Genome research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
41 citing papers in PubMed, 68 citations in OpenAlex.
- A single-cell transcriptomic atlas reveals the emergence of medusa-specific cell states in the scyphozoan Aurelia coerulea.PLoS biology · 2026Article
- Sustained ERK signaling couples the injury response to organizer formation during Hydra head regeneration.Developmental biology · 2026Article
- Functional Analysis of Ligand-Gated Chloride Channels in a Cnidarian Sheds Light on the Evolution of Inhibitory Signaling.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026Article
- Lineage-specific elaboration of a conserved cnidogenic program drives cnidocyte diversification and illuminates cell type evolution.Research square · 2026Article
- Article
- Dynamic cell fate transitions during morphallactic regeneration.Nature communications · 2026Article
- Evolutionary rewiring of the endomesoderm gene regulatory networks specify skeleton secreting cells in stony corals.bioRxiv : the preprint server for biology · 2026Article
- Dense and distributed neuropeptide network in the nerve net of Hydra vulgaris.PLoS computational biology · 2026Article
- An updated and spatially validated somatic single-cell atlas of Hydractinia symbiolongicarpus.BMC genomics · 2025Article
- Wnt signaling restores evolutionary loss of robust foot regeneration rates in Hydra.Nature communications · 2025Article
- Actin-binding protein tropomodulin-1 is necessary for basal constriction formation and bud detachment iniScience · 2025Article
- Extracellular matrix remodeling supportsbioRxiv : the preprint server for biology · 2025Article
- Examination of Germline and Somatic Intercellular Bridges in Hydra vulgaris Reveals Insights into the Evolutionarily Conserved Mechanism of Intercellular Bridge Formation.Molecular biology and evolution · 2025Article
- A molecular, spatial and regulatory atlas of the Hydra vulgaris nervous system.Development (Cambridge, England) · 2025Article
- Investigating the evolution and features of regeneration using cnidarians.Integrative and comparative biology · 2025Review
- Shedding Light on Patterns of Unconventional Expression of Opsin Genes in Hydra vulgaris.Integrative and comparative biology · 2025Article
- How Single-Cell Transcriptomics of Hydractinia Is Informing the Evolution of Cnidarian Sensory Systems.Integrative and comparative biology · 2025Review
- Establishing single cell RNA transcriptomics: a brief guide.Frontiers in zoology · 2025Review
- AnOpen biology · 2025Article
- Genome assembly of Bougainvillia cf. muscus (Cnidaria: Hydrozoa).G3 (Bethesda, Md.) · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
17 authors at 6 institutions in 2 countries.
Jack F CazetDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA.ORCID 0000-0002-7331-5631
Stefan SiebertDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA.ORCID 0000-0001-8181-912X
Hannah Morris LittleDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA.
Philip BertemesInstitute of Zoology, Center for Molecular Biosciences, University of Innsbruck, Innsbruck A-6020, Austria.ORCID 0000-0002-8892-1538
Abby S PrimackDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA.ORCID 0000-0002-7036-4737
Peter LadurnerInstitute of Zoology, Center for Molecular Biosciences, University of Innsbruck, Innsbruck A-6020, Austria.ORCID 0000-0002-0323-9266
Matthias AchrainerInstitute of Zoology, Center for Molecular Biosciences, University of Innsbruck, Innsbruck A-6020, Austria.
Mark T FredriksenComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
R Travis MorelandComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Sumeeta SinghComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Suiyuan ZhangComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.
Tyra G WolfsbergComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.ORCID 0000-0001-5646-9455
Christine E SchnitzlerWhitney Laboratory for Marine Bioscience and Department of Biology, University of Florida, St. Augustine, Florida 32080, USA.ORCID 0000-0002-5001-6524
Andreas D BaxevanisComputational and Statistical Genomics Branch, Division of Intramural Research, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.ORCID 0000-0002-5370-0014
Oleg SimakovDepartment of Molecular Evolution and Development, University of Vienna, 1010 Vienna, Austria.ORCID 0000-0002-3585-4511
Bert HobmayerInstitute of Zoology, Center for Molecular Biosciences, University of Innsbruck, Innsbruck A-6020, Austria.ORCID 0000-0002-3401-3294
Celina E JulianoDepartment of Molecular and Cellular Biology, University of California, Davis, California 95616, USA; cejuliano@ucdavis.edu.ORCID 0000-0003-4222-0987
National Institutes of Health · USUniversität Innsbruck · ATUniversity of California, Davis · USLyell Immunopharma (United States) · USUniversity of Florida · USUniversity of Vienna · AT
Funding
Phylogenomic Studies on the Evolution of Morphological ComplexityZIAHG000140 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAXEVANIS, ANDREAS · 2009 to 2025
$11.4MMechanisms of Hydra Development and RegenerationR35GM133689 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Celina Juliano · 2019 to 2026
$3.3MCharacterizing the molecular regulators of stem cell populations during homeostasis and regeneration in Hydractinia, an emerging cnidarianresearch organism; Administrative SupplementsR35GM138156 · NIGMS · UNIVERSITY OF FLORIDA · PI SCHNITZLER, CHRISTINE · 2020 to 2024
$1.9MStructural /Phylogenetic Studies of Homeodomain ProteinZ01HG000140 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAXEVANIS, ANDREAS D. · 1999 to 2008
$1.4MAcquisition of Covaris E220 and Sciclone G3 systems for high throughput sequencinS10OD010786 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COMAI, LUCA · 2012 to 2012
$311kGAP FILLING IN CHROMOSOME SPECIFIC COSMID CONTIG MAPSF05HG000140 · NHGRI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KALACHIKOV, SERGEI M · 1995 to 1995
–Austrian Science Fund FWF P 30347Intramural NIH HHS Z01 HG000140Intramural NIH HHS ZIA HG000140NHGRI NIH HHS F05 HG000140NIGMS NIH HHS R35 GM133689NIGMS NIH HHS R35 GM138156NIH HHS S10 OD010786
Abstract
The epithelial and interstitial stem cells of the freshwater polyp
Indexed as
HydraAnimalsCell DifferentiationChromatinChromosomesEpigenesis, GeneticChromatin
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.