Evidence map›Paper›PMID 36638831›Full record

ArticleJournal of the American Chemical Society2023

Liquid Droplet Aging and Seeded Fibril Formation of the Cytotoxic Granule Associated RNA Binding Protein TIA1 Low Complexity Domain.

Yuuki Wittmer, Khaled M Jami, Rachelle K Stowell, Truc Le, Ivan Hung, Dylan T Murray

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yuuki WittmerDepartment of Chemistry, University of California Davis, Davis, California 95616, United States.
Khaled M JamiDepartment of Chemistry, University of California Davis, Davis, California 95616, United States.
Rachelle K StowellDepartment of Chemistry, University of California Davis, Davis, California 95616, United States.
Truc LeDepartment of Chemistry, University of California Davis, Davis, California 95616, United States.
Ivan HungNational High Magnetic Field Laboratory, Tallahassee, Florida 32310, United States.ORCID 0000-0001-8916-739X
Dylan T MurrayDepartment of Chemistry, University of California Davis, Davis, California 95616, United States.ORCID 0000-0002-2402-810X
University of California, Davis · USNational High Magnetic Field Laboratory · US

Funding

Low-complexity domain protein molecular structure, conformational dynamics, and inter-protein interactions in human health and diseaseR35GM142892 · NIGMS · UNIVERSITY OF CONNECTICUT STORRS · PI MURRAY, DYLAN THOMAS · 2021 to 2025
$1.9M
NIGMS NIH HHS R35 GM142892
6 · The paper itself

Abstract

Protein domains biased toward a few amino acid types are vital for the formation of biomolecular condensates in living cells. These membraneless compartments are formed by molecules exhibiting a range of molecular motions and structural order. Missense mutations increase condensate persistence lifetimes or structural order, properties that are thought to underlie pathological protein aggregation. In the context of stress granules associated with neurodegenerative diseases, this process involves the rigidification of protein liquid droplets into β-strand rich protein fibrils. Here, we characterize the molecular mechanism underlying the rigidification of liquid droplets for the low complexity domain of the Cytotoxic granule associated RNA binding protein TIA1 (TIA1) stress granule protein and the influence of a disease mutation linked to neurodegenerative diseases. A seeding procedure and solid state nuclear magnetic resonance measurements show that the low complexity domain converges on a β-strand rich fibril conformation composed of 21% of the sequence. Additional solid state nuclear magnetic resonance measurements and difference spectroscopy show that aged liquid droplets of wild type and a proline-to-leucine mutant low complexity domain are composed of fibril assemblies that are conformationally heterogeneous and structurally distinct from the seeded fibril preparation. Regarding low complexity domains, our data support the functional template-driven formation of conformationally homogeneous structures, that rigidification of liquid droplets into conformationally heterogenous structures promotes pathological interactions, and that the effect of disease mutations is more nuanced than increasing thermodynamic stability or increasing β-strand structure content.

Indexed as

Neurodegenerative DiseasesAgedHumansMagnetic Resonance SpectroscopyProtein DomainsT-Cell Intracellular Antigen-1T-Cell Intracellular Antigen-1TIA1 protein, human

Identifiers

PMID36638831
PMCPMC9881004
OpenAlexW4316020773

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.