Evidence map›Paper›PMID 36638184›Full record

ArticleScience advances2023

A conditional

Georgia Katsioudi, René Dreos, Enes S Arpa, Sevasti Gaspari, Angelica Liechti, Miho Sato, Christian H Gabriel, Achim Kramer, Steven A Brown, David Gatfield

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Circadian ribosome profiling reveals a role for theProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Georgia KatsioudiCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0001-7007-9832
René DreosCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-0816-7775
Enes S ArpaCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0001-9685-5115
Sevasti GaspariCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-0596-4840
Angelica LiechtiCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-0166-0639
Miho SatoChronobiology and Sleep Research Group, Institute of Pharmacology and Toxicology, University of Zürich, Zürich, Switzerland.ORCID 0000-0001-9321-8487
Christian H GabrielCharité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Laboratory of Chronobiology, Berlin, Germany.ORCID 0000-0003-2081-1743
Achim KramerCharité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Laboratory of Chronobiology, Berlin, Germany.ORCID 0000-0001-9671-6078
Steven A BrownChronobiology and Sleep Research Group, Institute of Pharmacology and Toxicology, University of Zürich, Zürich, Switzerland.ORCID 0000-0001-5511-568X
David GatfieldCenter for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0001-5114-2824
University of Lausanne · CHHumboldt-Universität zu Berlin · DEUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonsense-mediated messenger RNA (mRNA) decay (NMD) has been intensively studied as a surveillance pathway that degrades erroneous transcripts arising from mutations or RNA processing errors. While additional roles in physiological control of mRNA stability have emerged, possible functions in mammalian physiology in vivo remain unclear. Here, we created a conditional mouse allele that allows converting the NMD effector nuclease SMG6 from wild-type to nuclease domain-mutant protein. We find that NMD down-regulation affects the function of the circadian clock, a system known to require rapid mRNA turnover. Specifically, we uncover strong lengthening of free-running circadian periods for liver and fibroblast clocks and direct NMD regulation of

Indexed as

Circadian ClocksNonsense Mediated mRNA DecayAnimalsCodon, NonsenseMiceRNA, MessengerRNA Processing, Post-TranscriptionalTranscription FactorsCodon, NonsenseRNA, MessengerTranscription Factors

Identifiers

PMID36638184
PMCPMC9839329
OpenAlexW4316015888

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.