Evidence map›Paper›PMID 36635624›Full record

ArticleBMC genomics2023

S100A9 plays a key role in Clostridium perfringens beta2 toxin-induced inflammatory damage in porcine IPEC-J2 intestinal epithelial cells.

Jie Li, Kaihui Xie, Jiaojiao Yang, Juanli Zhang, Qiaoli Yang, Pengfei Wang, Shuangbao Gun, Xiaoyu Huang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Uncovering the mechanism ofFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jie LiCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Kaihui XieCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Jiaojiao YangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Juanli ZhangCollege of Life Sciences, Longdong University, Qingyang, 745000, China.
Qiaoli YangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Pengfei WangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China.
Shuangbao GunCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China. gunsbao056@126.com.ORCID http://orcid.org/0000-0001-6242-7550
Xiaoyu HuangCollege of Animal Science and Technology, Gansu Agricultural University, Lanzhou, 730070, China. huanghxy100@163.com.ORCID http://orcid.org/0000-0001-9467-3406
Gansu Agricultural University · CNLongdong University · CN

Funding

Higher Education Innovation Fund of Gansu Province 2022B-106National Natural Science Foundation of China 31960646Protection and Quality Improvement of Gansu Local Pig Germplasm Resources (GSLK-2021-13)
6 · The paper itself

Abstract

backgroundAs an important regulator of autoimmune responses and inflammation, S100A9 may serve as a therapeutic target in inflammatory diseases. However, the role of S100A9 in Clostridium perfringens type C infectious diarrhea is poorly studied. The aim of our study was to screen downstream target genes regulated by S100A9 in Clostridium perfringens beta2 (CPB2) toxin-induced IPEC-J2 cell injury. We constructed IPEC-J2 cells with S100A9 knockdown and a CPB2-induced cell injury model, screened downstream genes regulated by S100A9 using RNA-Seq technique, and performed functional enrichment analysis. The function of S100A9 was verified using molecular biology techniques.

resultsWe identified 316 differentially expressed genes (DEGs), of which 221 were upregulated and 95 were downregulated. Functional enrichment analysis revealed that the DEGs were significantly enriched in cilium movement, negative regulation of cell differentiation, immune response, protein digestion and absorption, and complement and coagulation cascades. The key genes of immune response were TNF, CCL1, CCR7, CSF2, and CXCL9. When CPB2 toxin-induced IPEC-J2 cells overexpressed S100A9, Bax expression increased, Bcl-2 expression and mitochondrial membrane potential decreased, and SOD activity was inhibited.

conclusionIn conclusion, S100A9 was involved in CPB2-induced inflammatory response in IPEC-J2 cells by regulating the expression of downstream target genes, namely, TNF, CCL1, CCR7, CSF2, and CXCL9; promoting apoptosis; and aggravating oxidative cell damage. This study laid the foundation for further study on the regulatory mechanism underlying piglet diarrhea.

Indexed as

Bacterial ToxinsCalgranulin BIntestinesAnimalsClostridium perfringensDiarrheaEpithelial CellsInflammationReceptors, CCR7SwineBacterial ToxinsCalgranulin Bcpb2 protein, Clostridium perfringensReceptors, CCR7Clostridium perfringens type CFunctional verificationPiglet diarrheaRNA-SeqS100A9 target gene

Identifiers

PMID36635624
PMCPMC9835341
OpenAlexW4315701780

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.