Evidence map›Paper›PMID 36635478›Full record

ArticleMolecular neurobiology2023

Neurobiochemical, Peptidomic, and Bioinformatic Approaches to Characterize Tauopathy Peptidome Biomarker Candidates in Experimental Mouse Model of Traumatic Brain Injury.

Hamad Yadikar, Connor Johnson, Niko Pafundi, Lynn Nguyen, Milin Kurup, Isabel Torres, Albandery Al-Enezy, Zhihui Yang, Richard Yost, Firas H Kobeissy and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular neurobiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Origins, Technological Advancement, and Applications of Peptidomics.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 3 countries.

Hamad YadikarDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait. hamad.yadikar@ku.edu.kw.ORCID http://orcid.org/0000-0001-5112-9005
Connor JohnsonDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Niko PafundiDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Lynn NguyenDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Milin KurupDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Isabel TorresDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Albandery Al-EnezyDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Zhihui YangDepartment of Biological Sciences, Faculty of Science, Kuwait University, Kuwait, Kuwait.
Richard YostDepartment of Chemistry, Chemistry Laboratory Building, University of Florida, Gainesville, FL, 32611, USA.
Firas H KobeissyProgram for Neurotrauma, Neuroproteomics & Biomarkers Research, Departments of Emergency Medicine, Psychiatry, Neuroscience and Chemistry, University of Florida, Gainesville, FL, USA. firasko@ufl.edu.
Kevin K W WangProgram for Neurotrauma, Neuroproteomics & Biomarkers Research, Departments of Emergency Medicine, Psychiatry, Neuroscience and Chemistry, University of Florida, Gainesville, FL, USA. kwang@ufl.edu.
Kuwait University · KWUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Traumatic brain injury (TBI) is a multidimensional damage, and currently, no FDA-approved medicine is available. Multiple pathways in the cell are triggered through a head injury (e.g., calpain and caspase activation), which truncate tau and generate variable fragment sizes (MW 400-45,000 K). In this study, we used an open-head TBI mouse model generated by controlled cortical impact (CCI) and collected ipsilateral (IC) and contralateral (CC) mice htau brain cortices at one (D1) three (D3), and seven (D7) days post-injury. We implemented immunological (antibody-based detection) and peptidomic approaches (nano-reversed-phase liquid chromatography/tandem mass spectrometry) to investigate proteolytic tau peptidome (low molecular weight (LMW) < 10 K)) and pathological phosphorylation sites (high-molecular-weight (HMW); > 10 K) derived from CCI-TBI animal models. Our immunoblotting analysis verified tau hyperphosphorylation, HMW, and HMW breakdown products (HMW-BDP) formation of tau (e.g., pSer

Indexed as

Brain InjuriesBrain Injuries, TraumaticTauopathiesAnimalsBiomarkersDisease Models, AnimalHumansMicePeptide HydrolasesPeptidestau ProteinsBiomarkersPeptide HydrolasesPeptidestau ProteinsCCIPeptidome BiomarkersPeptidomicsTauopathyTau phosphorylationTBI

Identifiers

PMID36635478
OpenAlexW4315784080

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.