Evidence map›Paper›PMID 36633832›Full record

ArticleMolecular biotechnology2024

Molecular Dynamics Simulations Reveal Novel Interacting Regions of Human Prion Protein to Brucella abortus Hsp60 Protein.

Hoang-Anh Le-Dao, Thuan-Thien Dinh, Thuoc Linh Tran, Vannajan Sanghiran Lee, Hieu Tran-Van

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Molecular Chaperonin HSP60: Current Understanding and Future Prospects.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Hoang-Anh Le-Dao *Laboratory of Biosensors, Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh, Vietnam.
Thuan-Thien Dinh *Laboratory of Biosensors, Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh, Vietnam.
Thuoc Linh TranLaboratory of Biosensors, Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh, Vietnam.
Vannajan Sanghiran LeeDepartment of Chemistry, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
Hieu Tran-VanLaboratory of Biosensors, Faculty of Biology and Biotechnology, University of Science, Ho Chi Minh, Vietnam. tvhieu@hcmus.edu.vn.ORCID http://orcid.org/0000-0003-2782-5232
Vietnam National University Ho Chi Minh City · VNUniversity of Malaya · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The distinctive morphology characteristics of microfold cells (M cells) allow the vaccine antigen not only to interact with immune cells directly, but also to effectively stimulate mucosal immune responses via receptors on its apical surface. Human prion protein, a transmembrane receptor for Brucella abortus Hsp60, is highly expressed on the M cell surface. Nonetheless, this protein tends to express in inclusion body in prokaryotic hosts. In this study, the shorter interacting regions of human prion protein were identified via computational methods such as docking and molecular dynamics simulations to minimize its aggregation tendency. The computational calculations revealed three novel human prion protein-interacting regions, namely PrP125, PrP174, and PrP180. In accordance with in silico prediction, the biologically synthesized peptides fusing with GST tag demonstrated their specific binding to Hsp60 protein via pull-down assay. Hence, this finding laid the groundwork for M-cell targeting candidate validation through these newly identified interacting regions.

Indexed as

Bacterial ProteinsBrucella abortusChaperonin 60Molecular Dynamics SimulationPrion ProteinsHumansMolecular Docking SimulationProtein BindingBacterial ProteinsChaperonin 60Prion ProteinsHomology modelingHsp60 proteinHuman prion proteinM cellMolecular dockingMolecular dynamics (MDs)Pull-down assay

Identifiers

PMID36633832
PMCPMC9838441
OpenAlexW4315752521

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.