Evidence map›Paper›PMID 36633713›Full record

ArticleRice (New York, N.Y.)2023

Marker-Assisted Introgression of the Salinity Tolerance Locus Saltol in Temperate Japonica Rice.

Caterina Marè, Elisa Zampieri, Viviana Cavallaro, Julien Frouin, Cécile Grenier, Brigitte Courtois, Laurent Brottier, Gianni Tacconi, Franca Finocchiaro, Xavier Serrat and 12 more

Abstract read
In one paragraph

Article in Rice (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Rice Adaptation to Abiotic Stresses Caused by Soil Inorganic Elements.International journal of molecular sciences · 2025
    Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Caterina MarèCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017, Fiorenzuola d'Arda, Piacenza, Italy. caterina.mare@crea.gov.it.
Elisa ZampieriCouncil for Agricultural Research and Economics, Research Centre for Cereal and Industrial Crops, s.s. 11 to Torino, km 2.5, 13100, Vercelli, Italy.
Viviana CavallaroDepartment of Agricultural and Environmental Sciences - Production, Landscape, Agroenergy - DiSAA, University of Milan, Milan, Italy.
Julien FrouinCIRAD, UMR AGAP, 34398, Montpellier, France.
Cécile GrenierCIRAD, UMR AGAP, 34398, Montpellier, France.
Brigitte CourtoisCIRAD, UMR AGAP, 34398, Montpellier, France.
Laurent BrottierCIRAD, UMR AGAP, 34398, Montpellier, France.
Gianni TacconiCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017, Fiorenzuola d'Arda, Piacenza, Italy.
Franca FinocchiaroCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017, Fiorenzuola d'Arda, Piacenza, Italy.
Xavier SerratDepartament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Secció de Fisiologia Vegetal, Universitat de Barcelona, Barcelona, Spain.
Salvador NoguésDepartament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Secció de Fisiologia Vegetal, Universitat de Barcelona, Barcelona, Spain.
Mireia BundóCentre for Research in Agricultural Genomics (CRAG)-CSIC-IRTA-UAB-UB, Bellaterra (Cerdanyola del Vallès), Barcelona, Spain.
Blanca San SegundoCentre for Research in Agricultural Genomics (CRAG)-CSIC-IRTA-UAB-UB, Bellaterra (Cerdanyola del Vallès), Barcelona, Spain.
Noemi NegriniDepartment of Agricultural and Environmental Sciences - Production, Landscape, Agroenergy - DiSAA, University of Milan, Milan, Italy.
Michele PesentiDepartment of Agricultural and Environmental Sciences - Production, Landscape, Agroenergy - DiSAA, University of Milan, Milan, Italy.
Gian Attilio SacchiDepartment of Agricultural and Environmental Sciences - Production, Landscape, Agroenergy - DiSAA, University of Milan, Milan, Italy.
Giacomo GavinaSIS Società Italiana Sementi, Via Mirandola, 5, 40068, San Lazzaro di Savena, Bologna, Italy.
Riccardo BovinaSIS Società Italiana Sementi, Via Mirandola, 5, 40068, San Lazzaro di Savena, Bologna, Italy.
Stefano MonacoCouncil for Agricultural Research and Economics, Research Centre for Cereal and Industrial Crops, s.s. 11 to Torino, km 2.5, 13100, Vercelli, Italy.
Alessandro TondelliCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017, Fiorenzuola d'Arda, Piacenza, Italy.
Luigi CattivelliCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Via S. Protaso 302, 29017, Fiorenzuola d'Arda, Piacenza, Italy.
Giampiero ValèDipartimento per lo Sviluppo Sostenibile e la Transizione Ecologica, University of Piemonte Orientale, Piazza S. Eusebio 5, 13100, Vercelli, Italy. giampiero.vale@uniupo.it.

Funding

NEURICE project (New commercial European RICE (Oryza sativa) harbouring salt tolerance alleles to protect the rice sector against climate change and apple snail (Pomacea insularum) invasion Grant Agreement N. 678168
6 · The paper itself

Abstract

backgroundRice is one of the most salt sensitive crops at seedling, early vegetative and reproductive stages. Varieties with salinity tolerance at seedling stage promote an efficient growth at early stages in salt affected soils, leading to healthy vegetative growth that protects crop yield. Saltol major QTL confers capacity to young rice plants growing under salt condition by maintaining a low Na

resultsMarker-assisted backcross (MABC) procedure was adopted to transfer Saltol locus conferring salt tolerance at seedling stage from donor indica IR64-Saltol to two temperate japonica varieties, Vialone Nano and Onice. Forward and background selections were accomplished using polymorphic KASP markers and a final evaluation of genetic background recovery of the selected lines was conducted using 15,580 SNP markers obtained from Genotyping by Sequencing. Three MABC generations followed by two selfing, allowed the identification of introgression lines achieving a recovery of the recurrent parent (RP) genome up to 100% (based on KASP markers) or 98.97% (based on GBS). Lines with highest RP genome recovery (RPGR) were evaluated for agronomical-phenological traits in field under non-salinized conditions. VN1, VN4, O1 lines were selected considering the agronomic evaluations and the RPGR% results as the most interesting for commercial exploitation. A physiological characterization was conducted by evaluating salt tolerance under hydroponic conditions. The selected lines showed lower standard evaluation system (SES) scores: 62% of VN4, and 57% of O1 plants reaching SES 3 or SES 5 respectively, while only 40% of Vialone Nano and 25% of Onice plants recorded scores from 3 to 5, respectively. VN1, VN4 and O1 showed a reduced electrolyte leakage values, and limited negative effects on relative water content and shoot/root fresh weight ratio.

conclusionThe Saltol locus was successfully transferred to two elite varieties by MABC in a time frame of three years. The application of background selection until BC

Indexed as

Background selectionBreedingKASP markersMABCRecovery percentageRiceSaltolSalt tolerance

Identifiers

PMID36633713
PMCPMC9837369

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.