Evidence map›Paper›PMID 36631833›Full record

ArticleMicrobiome2023

Nationwide genomic surveillance reveals the prevalence and evolution of honeybee viruses in China.

Nannan Li, Cixiu Li, Tao Hu, Juan Li, Hong Zhou, Jingkai Ji, Jiangli Wu, Weipeng Kang, Edward C Holmes, Weifeng Shi and 1 more

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

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  5. Comprehensive virome analysis ofFrontiers in insect science · 2026
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  7. Seasonal dynamics of honey bee pathogens andFrontiers in insect science · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Nannan Li *Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Cixiu Li *Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China.
Tao Hu *Key Laboratory of Emerging Infectious Diseases in Universities of Shandong, Department of Pathogen Biology, School of Clinical and Basic Medical Sciences, Shandong First Medical University & Shandong Academy of Medical Sciences, Taian, 271000, China.
Juan LiShandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China.
Hong ZhouShandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China.
Jingkai JiShandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China.
Jiangli WuInstitute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Weipeng KangInstitute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.
Edward C HolmesSydeny Institute for Infectious Diseases, School of Medical Sciences, The University of Sydney, Sydney, NSW, 2006, Australia.
Weifeng ShiKey Laboratory of Emerging Infectious Diseases in Universities of Shandong, Department of Pathogen Biology, School of Clinical and Basic Medical Sciences, Shandong First Medical University & Shandong Academy of Medical Sciences, Taian, 271000, China. shiwf@ioz.ac.cn.
Shufa XuInstitute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing, 100193, China. xushufa@caas.cn.
Shandong First Medical University · CNChinese Academy of Agricultural Sciences · CNInstitute of Apiculture Research · CNShandong Provincial Hospital · CNUniversity of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe economic and environmental value of honeybees has been severely challenged in recent years by the collapse of their colonies worldwide, often caused by outbreaks of infectious diseases. However, our understanding of the diversity, prevalence, and transmission of honeybee viruses is largely obscure due to a lack of large-scale and longitudinal genomic surveillance on a global scale.

resultsWe report the meta-transcriptomic sequencing of nearly 2000 samples of the two most important economic and widely maintained honeybee species, as well as an associated ectoparasite mite, collected across China during 2016-2019. We document the natural diversity and evolution of honeybee viruses in China, providing evidence that multiple viruses commonly co-circulate within individual bee colonies. We also expanded the genomic data for 12 important honeybee viruses and revealed novel genetic variants and lineages associated with China. We identified more than 23 novel viruses from the honeybee and mite viromes, with some exhibiting ongoing replication in their respective hosts. Together, these data provide additional support to the idea that mites are an important reservoir and spill-over host for honeybee viruses.

conclusionsOur data show that honeybee viruses are more widespread, prevalent, and genetically diverse than previously realized. The information provided is important in mitigating viral infectious diseases in honeybees, in turn helping to maintain sustainable productive agriculture on a global scale. Video Abstract.

Indexed as

Communicable DiseasesVarroidaeVirusesAnimalsBeesChinaGenomicsPrevalenceEctoparasite mitesEvolutionHoneybeesMeta-transcriptomicsVirus discoveryVirus landscape

Identifiers

PMID36631833
PMCPMC9832778
OpenAlexW4315650892

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.