Evidence map›Paper›PMID 36631623›Full record

ArticleLeukemia2023

The histone demethylase KDM5C functions as a tumor suppressor in AML by repression of bivalently marked immature genes.

Mette Louise Trempenau, Mikkel Bruhn Schuster, Sachin Pundhir, Mafalda Araujo Pereira, Adrija Kalvisa, Marta Tapia, Jinyu Su, Ying Ge, Bauke de Boer, Alexander Balhuizen and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  8. Epigenetic regulation of cancer stemness.Signal transduction and targeted therapy · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 4 countries.

Mette Louise TrempenauThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.ORCID 0000-0003-4293-1260
Mikkel Bruhn Schuster *The Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Sachin Pundhir *The Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Mafalda Araujo Pereira *The Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Adrija KalvisaThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Marta TapiaThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Jinyu SuThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.ORCID 0000-0003-3743-0023
Ying GeThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Bauke de BoerThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.ORCID 0000-0002-7866-3803
Alexander BalhuizenThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.ORCID 0000-0001-7581-121X
Frederik Otzen BaggerThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Pavel ShliahaDepartment of Biochemistry and Molecular Biology and VILLUM Center for Bioanalytical Sciences, University of Southern Denmark (Odense), Odense, Denmark.
Patrycja SroczynskaBiotech Research and Innovation Centre, University of Copenhagen, Copenhagen, Denmark.
Julian WalfridssonBiotech Research and Innovation Centre, University of Copenhagen, Copenhagen, Denmark.
Kirsten GrønbækBiotech Research and Innovation Centre, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-1535-9601
Kim Theilgaard-MönchThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark.
Ole N JensenDepartment of Biochemistry and Molecular Biology and VILLUM Center for Bioanalytical Sciences, University of Southern Denmark (Odense), Odense, Denmark.
Kristian HelinBiotech Research and Innovation Centre, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0003-1975-6097
Bo T PorseThe Finsen Laboratory, Copenhagen University Hospital-Rigshospitalet, Copenhagen, Denmark. bo.porse@finsenlab.dk.ORCID 0000-0001-6043-0844
University of Copenhagen · DKUniversity of Southern Denmark · DK

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

Epigenetic regulators are frequently mutated in hematological malignancies including acute myeloid leukemia (AML). Thus, the identification and characterization of novel epigenetic drivers affecting AML biology holds potential to improve our basic understanding of AML and to uncover novel options for therapeutic intervention. To identify novel tumor suppressive epigenetic regulators in AML, we performed an in vivo short hairpin RNA (shRNA) screen in the context of CEBPA mutant AML. This identified the Histone 3 Lysine 4 (H3K4) demethylase KDM5C as a tumor suppressor, and we show that reduced Kdm5c/KDM5C expression results in accelerated growth both in human and murine AML cell lines, as well as in vivo in Cebpa mutant and inv(16) AML mouse models. Mechanistically, we show that KDM5C act as a transcriptional repressor through its demethylase activity at promoters. Specifically, KDM5C knockdown results in globally increased H3K4me3 levels associated with up-regulation of bivalently marked immature genes. This is accompanied by a de-differentiation phenotype that could be reversed by modulating levels of several direct and indirect downstream mediators. Finally, the association of KDM5C levels with long-term disease-free survival of female AML patients emphasizes the clinical relevance of our findings and identifies KDM5C as a novel female-biased tumor suppressor in AML.

Indexed as

Histone DemethylasesLeukemia, Myeloid, AcuteAnimalsCell DifferentiationCell LineClinical RelevanceFemaleHumansMiceHistone DemethylasesKDM5C protein, humanKdm5c protein, mouse

Identifiers

PMID36631623
PMCPMC9991918
OpenAlexW4315753909

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.