Evidence map›Paper›PMID 36630443›Full record

ArticlePLoS pathogens2023

G-quadruplexes formed by Varicella-Zoster virus reiteration sequences suppress expression of glycoprotein C and regulate viral cell-to-cell spread.

Woo-Chang Chung, Subramaniyam Ravichandran, Daegyu Park, Gwang Myeong Lee, Young-Eui Kim, Youngju Choi, Moon Jung Song, Kyeong Kyu Kim, Jin-Hyun Ahn

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Article in PLoS pathogens, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Woo-Chang ChungDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Subramaniyam RavichandranDepartment of Precision Medicine, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Daegyu ParkDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Gwang Myeong LeeDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Young-Eui KimDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Youngju ChoiDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Moon Jung SongDepartment of Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, Republic of Korea.
Kyeong Kyu KimDepartment of Precision Medicine, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.
Jin-Hyun AhnDepartment of Microbiology, Sungkyunkwan University School of Medicine, Suwon, Republic of Korea.ORCID 0000-0002-9545-9062
Sungkyunkwan University · KRSamsung Medical Center · KRKorea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

G-quadruplex (G4) formed by repetitive guanosine-rich sequences plays important roles in diverse cellular processes; however, its roles in viral infection are not fully understood. In this study, we investigated the genome-wide distribution of G4-forming sequences (G4 motifs) in Varicella-Zoster virus (VZV) and found that G4 motifs are enriched in the internal repeat short and the terminal repeat short regions flanking the unique short region and also in some reiteration (R) sequence regions. A high density of G4 motifs in the R2 region was found on the template strand of ORF14, which encodes glycoprotein C (gC), a virulent factor for viral growth in skin. Analyses such as circular dichroism spectroscopy, thermal difference spectra, and native polyacrylamide gel electrophoresis with oligodeoxynucleotides demonstrated that several G4 motifs in ORF14 form stable G4 structures. In transfection assays, gC expression from the G4-disrupted ORF14 gene was increased at the transcriptional level and became more resistant to suppression by G4-ligand treatment. The recombinant virus containing the G4-disrupted ORF14 gene expressed a higher level of gC mRNA, while it showed a slightly reduced growth. This G4-disrupted ORF14 virus produced smaller plaques than the wild-type virus. Our results demonstrate that G4 formation via reiteration sequences suppresses gC expression during VZV infection and regulates viral cell-to-cell spread.

Indexed as

G-QuadruplexesCircular DichroismGenomeHerpesvirus 3, HumanViral Envelope Proteinsglycoprotein gC, herpes simplex virus type 1Viral Envelope Proteins

Identifiers

PMID36630443
PMCPMC9873165
OpenAlexW4315619254

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.