Evidence map›Paper›PMID 36629410›Full record

ArticlemBio2023

Heterogeneity in Spore Aggregation and Germination Results in Different Sized, Cooperative Microcolonies in an Aspergillus niger Culture.

Jun Lyu, Martin Tegelaar, Harm Post, Juan Moran Torres, Costanza Torchia, A F Maarten Altelaar, Robert-Jan Bleichrodt, Hans de Cock, Luis G Lugones, Han A B Wösten

Abstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jun LyuMicrobiology, Utrecht University, Utrecht, the Netherlands.
Martin TegelaarMicrobiology, Utrecht University, Utrecht, the Netherlands.
Harm PostBiomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, the Netherlands.
Juan Moran TorresMicrobiology, Utrecht University, Utrecht, the Netherlands.
Costanza TorchiaMicrobiology, Utrecht University, Utrecht, the Netherlands.
A F Maarten AltelaarBiomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, the Netherlands.
Robert-Jan BleichrodtMicrobiology, Utrecht University, Utrecht, the Netherlands.
Hans de CockMicrobiology, Utrecht University, Utrecht, the Netherlands.ORCID 0000-0002-8420-6764
Luis G LugonesMicrobiology, Utrecht University, Utrecht, the Netherlands.
Han A B WöstenMicrobiology, Utrecht University, Utrecht, the Netherlands.ORCID 0000-0002-0399-3648

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fungus Aspergillus niger is among the most abundant fungi in the world and is widely used as a cell factory for protein and metabolite production. This fungus forms asexual spores called conidia that are used for dispersal. Notably, part of the spores and germlings aggregate in an aqueous environment. The aggregated conidia/germlings give rise to large microcolonies, while the nonaggregated spores/germlings result in small microcolonies. Here, it is shown that small microcolonies release a larger variety and quantity of secreted proteins compared to large microcolonies. Yet, the secretome of large microcolonies has complementary cellulase activity with that of the small microcolonies. Also, large microcolonies are more resistant to heat and oxidative stress compared to small microcolonies, which is partly explained by the presence of nongerminated spores in the core of the large microcolonies. Together, it is proposed that heterogeneity in germination and aggregation has evolved to form a population of different sized A. niger microcolonies, thereby increasing stress survival and producing a meta-secretome more optimally suited to degrade complex substrates.

Indexed as

Aspergillus nigerHot TemperatureFungal ProteinsSpores, FungalWaterFungal ProteinsWaterAspergillus nigercell factorycolony morphologyconidiafungusheterogeneityprotein secretionsecretomesporesstress resistancestress survival

Identifiers

PMID36629410
PMCPMC9973262

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.