Evidence map›Paper›PMID 36628292›Full record

ArticleAmerican journal of cancer research2022

Risk stratification of patients with right-sided colorectal cancer based on the tumor-infiltrating M1 macrophage.

Dong Min Lim, Junho Kang, Soo-Yeon Woo, Hee-Sun Choi, Munju Kwon, Jayoung Kim, Hae Ryoun Park, Keehoon Jung, Ninib Baryawno, Hyung-Sik Kim and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of cancer research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Dong Min LimInterdisciplinary Program of Genomic Data Science, Pusan National University Yangsan, Republic of Korea.
Junho KangMedical Research Institute, Pusan National University Busan, Republic of Korea.
Soo-Yeon WooDepartment of Convergence Medicine, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Hee-Sun ChoiDepartment of Convergence Medicine, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Munju KwonDepartment of Convergence Medicine, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Jayoung KimDepartment of Convergence Medicine, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Hae Ryoun ParkDepartment of Oral Pathology, School of Dentistry, Pusan National University Yangsan, Republic of Korea.
Keehoon JungDepartment of Anatomy and Cell Biology and Department of Biomedical Sciences, Seoul National University College of Medicine Seoul, Republic of Korea.
Ninib BaryawnoChildhood Cancer Research Unit, Department of Women's and Children's Health, Karolinska Institutet Stockholm 17177, Sweden.
Hyung-Sik KimDepartment of Oral Biochemistry, School of Dentistry, Pusan National University Yangsan 50612, Republic of Korea.
Dongjun LeeDepartment of Convergence Medicine, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Yun Hak KimDepartment of Anatomy, School of Medicine, Pusan National University Yangsan, Republic of Korea.
Pusan National University Yangsan Hospital · KRPusan National University · KRPusan National University Dental Hospital · KRKarolinska Institutet · SENew Generation University College · ETPusan National University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The homing of M1 and M2 macrophages may play distinct roles in the tumor microenvironment (TME). However, these roles of macrophages in the TME remain unclear. We downloaded RNA sequencing data from The Cancer Genome Atlas (TCGA) database for patients with CRC. Subsequently, Kaplan-Meier survival curves were generated to assess the differential infiltration of M1 and M2 macrophages based on CRC location. Differentially expressed gene (DEG) and functional analyses were performed to screen the roles of DEGs. Critical prognostic genes were identified using least absolute shrinkage and selection operator regression. The risk scores were calculated for each patient. In patients with right-sided CRC, reduced M1 macrophage infiltration was associated with poor prognosis. M1 macrophage infiltration positively correlated with CD8+ T cell infiltration. A risk model was developed and validated for performance using GSE103479 and GSE72970. Nine genes were identified as independent prognostic genes that could be potential biomarkers for effectively predicting survival in patients with right-sided CRC. Kaplan-Meier curves for overall survival and progression-free survival analyses revealed that the high-risk group of patients with right-sided CRC had a poor prognosis. This novel M1 macrophage-related risk model may provide a gene signature for predicting the survival outcomes of patients with right-sided CRC and facilitate further studies examining the relationship between infiltration of M1 macrophages and the prognosis of such patients.

Indexed as

Colorectal cancercolorectal cancer locationLASSO regressionM1 macrophagetumor microenvironment

Identifiers

PMID36628292
PMCPMC9827086
OpenAlexW4315619833

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.