Evidence map›Paper›PMID 36628224›Full record

ArticleAmerican journal of translational research2022

Prognostic value and risk model construction of hypoxic stress-related features in predicting gastric cancer.

Jiamin Guo, Wen Xing, Wei Liu, Jing Liu, Jing Zhang, Zuming Pang

Open access · greenAbstract read
In one paragraph

Article in American journal of translational research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 2 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jiamin GuoAbdominal Oncology Surgery, Shaanxi Province Cancer Hospital No. 309, Yanta West Road, Yanta District, Xi'an 710061, Shaanxi, China.
Wen XingInternal Medicine, Northwest University Hospital No. 229 Taibai North Road, Beilin District, Xi'an 710061, Shaanxi, China.
Wei LiuAbdominal Oncology Surgery, Shaanxi Province Cancer Hospital No. 309, Yanta West Road, Yanta District, Xi'an 710061, Shaanxi, China.
Jing LiuDepartment of Gastroenterology, Xianyang First People's Hospital No. 10, Biyuan Road, Qindu District, Xianyang 712000, Shaanxi, China.
Jing ZhangInternal Medicine, Xianyang Hospital of Yan'an University No. 38 Wenlin Road, Weicheng District, Xianyang 712000, Shaanxi, China.
Zuming PangDepartment of Gastroenterology, Xianyang First People's Hospital No. 10, Biyuan Road, Qindu District, Xianyang 712000, Shaanxi, China.
Xian Yang Central Hospital · CNShaanxi Provincial People's Hospital · CNNorthwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveHypoxia promotes tumor progression from multiple aspects, including metabolism, proliferation, migration and angiogenesis. Therefore, a thorough understanding of the impact of hypoxia on gastric adenocarcinoma (STAD) is warranted. The aim of the present study was to find a prognostic model of hypoxia in gastric cancer (GC) and its relationship with the immune microenvironment.

methodsDistinct hypoxia-related patterns were identified with an unsupervised consensus clustering algorithm in STAD patients from the Gene Expression Omnibus (GEO) and the cancer genome atlas (TCGA) cohorts. The different biological processes among different hypoxia-related clusters were then explored with the algorithm of single sample gene set enrichment analysis. Then hypoxia-related Hub genes were selected by weighted gene co-expression network analysis (WGCNA) prior to the construction of a hypoxia-related gene prognostic model. The model was constructed using multivariate Cox regression analysis, least absolute shrinkage and selection operator (LASSO) regression and univariate Cox regression analysis. The relationship between immune infiltration and hypoxia-related features was analyzed.

resultsWe identified a hypoxia-related cluster (magenta) by WGCNA and found that different prognosis can be evidently induced by various hypoxia response patterns. LASSO analysis found seven hypoxia-related genes CPZ, LBH, NOX4, NRP1, NOS3, C3orf36 and CDH6, which were then used for the construction of hypoxia-related gene prognostic model. The model was verified by TCGA database and GEO dataset and showing good prognostic value.

conclusionsA novel hypoxia-related prognostic signature was constructed to predict prognosis and correlate with immune infiltration in STAD. Hypoxia-related prognostic features are expected to be a new prognostic tool for GC.

Indexed as

Gastric adenocarcinomahypoxiaLASSOrisk modelWGCNA

Identifiers

PMID36628224
PMCPMC9827339
OpenAlexW4315621351

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.