Evidence map›Paper›PMID 36627630›Full record

ArticleBMC biology2023

Lentiviral in situ targeting of stem cells in unperturbed intestinal epithelium.

George B Garside, Madeline Sandoval, Slobodan Beronja, K Lenhard Rudolph

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 3 countries.

George B GarsideLeibniz Institute on Aging, Fritz Lipmann Institute, 07745, Jena, Germany.ORCID 0000-0002-8772-9616
Madeline SandovalDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, 98109, USA.ORCID 0000-0003-1309-1645
Slobodan BeronjaDivision of Human Biology, Fred Hutchinson Cancer Center, Seattle, WA, 98109, USA. beronja@fredhutch.org.ORCID 0000-0002-6769-9261
K Lenhard RudolphLeibniz Institute on Aging, Fritz Lipmann Institute, 07745, Jena, Germany. lenhard.rudolph@leibniz-fli.de.ORCID 0000-0002-4839-2862
Cape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZAFred Hutch Cancer Center · USLeibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DENational Center for Tumor Diseases · DE

Funding

Differentiation balances oncogene-driven proliferation to maintain epidermal homeostasisR01AR070780 · NIAMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Slobodan Beronja · 2017 to 2026
$4.2M
European Research Council 323136NIAMS NIH HHS R01 AR070780
6 · The paper itself

Abstract

backgroundMethods for the long-term in situ transduction of the unperturbed murine intestinal epithelium have not been developed in past research. Such a method could speed up functional studies and screens to identify genetic factors influencing intestinal epithelium biology. Here, we developed an efficient method achieving this long-sought goal.

resultsWe used ultrasound-guided microinjections to transduce the embryonic endoderm at day 8 (E8.0) in utero. The injection procedure can be completed in 20 min and had a 100% survival rate. By injecting a small volume (0.1-0.2 μl) of concentrated virus, single shRNA constructs as well as lentiviral libraries can successfully be transduced. The new method stably and reproducibly targets adult intestinal epithelium, as well as other endoderm-derived organs such as the lungs, pancreas, liver, stomach, and bladder. Postnatal analysis of young adult mice indicates that single transduced cells at E8.0 gave rise to crypt fields that were comprised of 20-30 neighbouring crypts per crypt-field at 90 days after birth. Lentiviral targeting of Apc

conclusionsThis study develops a novel technique enabling robust and reproducible in vivo targeting of intestinal stem cells in situ in the unperturbed intestinal epithelium across different regions of the intestine. In vivo somatic gene editing and genetic screening of lentiviral libraries has the potential to speed up discoveries and mechanistic understanding of genetic pathways controlling the biology of the intestinal epithelium during development and postnatal life. The here developed method enables such approaches.

Indexed as

Genes, APCTumor Suppressor Protein p53AnimalsIntestinal MucosaMiceMice, TransgenicStem CellsTumor Suppressor Protein p53APCClonalityCrypt formationEndodermGenetic engineeringIntestinal stem cellsIntestineMicroinjectionStable in vivo targetingTransduction

Identifiers

PMID36627630
PMCPMC9832770
OpenAlexW4315487970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.