Evidence map›Paper›PMID 36625670›Full record

ArticleMicrobiology spectrum2023

Regulation of Helicobacter pylori Urease and Acetone Carboxylase Genes by Nitric Oxide and the CrdRS Two-Component System.

Madison G McKinsey, Miranda Y Bate, Lauren M Tramonte, Emely Y Avalos, John Loh, Timothy L Cover, Mark H Forsyth

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. NO: a key player in microbiome dynamics and cancer pathogenesis.Frontiers in cellular and infection microbiology · 2025
    Review
  4. Novel therapeutic regimens againstFrontiers in microbiology · 2024
    Review
  5. Article
  6. Biofilm ofAntibiotics (Basel, Switzerland) · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Madison G McKinseyDepartment of Biology, College of William & Mary, Williamsburg, Virginia, USA.
Miranda Y BateDepartment of Biology, College of William & Mary, Williamsburg, Virginia, USA.
Lauren M TramonteDepartment of Biology, College of William & Mary, Williamsburg, Virginia, USA.
Emely Y AvalosDepartment of Biology, College of William & Mary, Williamsburg, Virginia, USA.
John LohDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.
Timothy L CoverDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, Tennessee, USA.ORCID 0000-0001-8503-002X
Mark H ForsythDepartment of Biology, College of William & Mary, Williamsburg, Virginia, USA.ORCID 0000-0001-8653-6508
William & Mary · USVanderbilt University · US

Funding

Role of Iron and B-Catenin Activation in Gastric CarcinogenesisP01CA116087 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2009 to 2026
$27.5M
Structure-function analysis of H. pylori VacAR01AI039657 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI TIMOTHY L COVER · 1996 to 2026
$8.3M
Type IV Protein Secretion in Helicobacter pyloriR01AI118932 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COVER, TIMOTHY L, OHI, MELANIE DIANE · 2016 to 2025
$6.7M
Regulatory Mechanisms of Outer Membrane Protein Expression in Helicobacter pyloriR15AI133470 · NIAID · COLLEGE OF WILLIAM AND MARY · PI FORSYTH, MARK H · 2019 to 2019
$413k
"Pathogenesis of Helicobacter pylori Infection"I01BX004447 · VA · VETERANS HEALTH ADMINISTRATION · PI TIMOTHY L COVER · 2019 to 2026
–
BLRD VA I01 BX004447NCI NIH HHS P01 CA116087NIAID NIH HHS R01 AI039657NIAID NIH HHS R01 AI118932NIAID NIH HHS R15 AI133470
6 · The paper itself

Abstract

Helicobacter pylori colonizes the human gastric mucosa and causes various gastroduodenal diseases, including peptic ulceration and gastric cancer. Colonization requires the actions of two-component systems (TCSs) to sense and respond to changes in the host environment. In this study, we evaluated gene regulation mediated by the CrdRS TCS. Few studies have evaluated this TCS, leaving the signal(s) yet to be exhaustively determined and a need for a more complete regulon to be delineated. We performed RNA sequencing (RNA-Seq) on three isogenic H. pylori 26695 mutants: a control, a mutant with deletion of the sensory histidine kinase, Δ

Indexed as

Helicobacter InfectionsHelicobacter pyloriBacterial ProteinsCarboxy-LyasesHumansNitric OxideUreaseacetone carboxylaseBacterial ProteinsCarboxy-LyasesNitric OxideUreasegene regulationHelicobactertwo-component systemurease

Identifiers

PMID36625670
PMCPMC9927306
OpenAlexW4313950084

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.