Evidence map›Paper›PMID 36624379›Full record

ArticleBMC genomics2023

Silencing of GhORP_A02 enhances drought tolerance in Gossypium hirsutum.

Sani Muhammad Tajo, Zhaoe Pan, Yinhua Jia, Shoupu He, Baojun Chen, Salisu Bello Sadau, Yusuf Km, Aboleri Adijat Ajadi, Mian Faisal Nazir, Umar Auta and 2 more

Abstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Sani Muhammad TajoState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Zhaoe PanState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Yinhua JiaState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Shoupu HeState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Baojun ChenState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Salisu Bello SadauState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Yusuf KmBioresources Development Centre, National Biotechnology Development Agency, Abuja, Nigeria.
Aboleri Adijat AjadiBiotechnology Unit, National Cereal Research Institute, Bida, Nigeria.
Mian Faisal NazirState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China.
Umar AutaBioresources Development Centre, National Biotechnology Development Agency, Abuja, Nigeria.
Xiaoli GengState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China. czxiaoli@126.com.
Xiongming DuState Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang, China. duxiongminglab@caas.cn.

Funding

Research on key technologies of cotton germplasm resource collection and excellent gene mining, Major science and technology projects of Xinjiang Uygur Autonomous Region 2022A03004-2The Ministry of Agriculture and Rural Affairs of China's Purchase Service 19221957
6 · The paper itself

Abstract

backgroundORP (Oxysterol-binding protein-related proteins) genes play a role in lipid metabolism, vesicular transferring and signaling, and non-vesicular sterol transport. However, no systematic identification and analysis of ORP genes have been reported in cotton.

resultIn this study, we identified 14, 14, 7, and 7 ORP genes in G. hirsutum, G. barbadense, G. arboreum, and G. raimondii, respectively. Phylogenetic analysis showed that all ORP genes could be classified into four groups. Gene structure and conserved motif analysis suggest that the function of this gene family was conserved. The Ka/Ks analysis showed that this gene family was exposed to purifying selection during evolution. Transcriptome data showed that four ORP genes, especially GhORP_A02, were induced by abiotic stress treatment. The cis-acting elements in the ORP promoters were responsive to phytohormones and various abiotic stresses. The silenced plants of GhORP_A02 were more sensitive to drought stress when compared to control.

conclusionThe major finding of this study shed light on the potential role of ORP genes in abiotic stress and provided a fundamental resource for further analysis in cotton.

Indexed as

Drought ResistanceGossypiumGene Expression Regulation, PlantMultigene FamilyPhylogenyPlant ProteinsStress, PhysiologicalPlant ProteinsDroughtGossypium hirsutumORP genesVIGS

Identifiers

PMID36624379
PMCPMC9830788

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.