Evidence map›Paper›PMID 36623275›Full record

ArticleACS synthetic biology2023

Functional Deimmunization of Botulinum Neurotoxin Protease Domain via Computationally Driven Library Design and Ultrahigh-Throughput Screening.

Yongliang Fang, Andrew Y Chang, Deeptak Verma, Shin-Ichiro Miyashita, Susan Eszterhas, Pyung-Gang Lee, Yi Shen, Lydia R Davis, Min Dong, Chris Bailey-Kellogg and 1 more

Abstract read
In one paragraph

Article in ACS synthetic biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yongliang FangThayer School of Engineering, Dartmouth, Hanover, New Hampshire 03755, United States.
Andrew Y ChangThayer School of Engineering, Dartmouth, Hanover, New Hampshire 03755, United States.
Deeptak VermaDepartment of Computer Science, Dartmouth, Hanover, New Hampshire 03755, United States.
Shin-Ichiro MiyashitaDepartment of Urology, Boston Children's Hospital, Boston, Massachusetts 02115, United States.
Susan EszterhasThayer School of Engineering, Dartmouth, Hanover, New Hampshire 03755, United States.
Pyung-Gang LeeDepartment of Urology, Boston Children's Hospital, Boston, Massachusetts 02115, United States.
Yi ShenDepartment of Urology, Boston Children's Hospital, Boston, Massachusetts 02115, United States.
Lydia R DavisThayer School of Engineering, Dartmouth, Hanover, New Hampshire 03755, United States.
Min DongDepartment of Urology, Boston Children's Hospital, Boston, Massachusetts 02115, United States.
Chris Bailey-KelloggDepartment of Computer Science, Dartmouth, Hanover, New Hampshire 03755, United States.
Karl E GriswoldThayer School of Engineering, Dartmouth, Hanover, New Hampshire 03755, United States.ORCID 0000-0002-9835-3394

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Understanding the role of RNA-binding protein mutations in cancerP20GM113132 · NIGMS · DARTMOUTH COLLEGE · PI MIERKE, DALE F · 2016 to 2025
$25.9M
Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI Hisashi Umemori · 2021 to 2026
$9.4M
Functional Deimmunization of Therapeutic ProteinsR01GM098977 · NIGMS · DARTMOUTH COLLEGE · PI BAILEY-KELLOGG, CHRIS, GRISWOLD, KARL E · 2011 to 2019
$3.4M
NCI NIH HHS P30 CA023108NICHD NIH HHS P50 HD105351NIGMS NIH HHS P20 GM113132NIGMS NIH HHS R01 GM098977
6 · The paper itself

Abstract

Botulinum neurotoxin serotype A (BoNT/A) is a widely used cosmetic agent that also has diverse therapeutic applications; however, adverse antidrug immune responses and associated loss of efficacy have been reported in clinical uses. Here, we describe computational design and ultrahigh-throughput screening of a massive BoNT/A light-chain (BoNT/A-LC) library optimized for reduced T cell epitope content and thereby dampened immunogenicity. We developed a functional assay based on bacterial co-expression of BoNT/A-LC library members with a Förster resonance energy transfer (FRET) sensor for BoNT/A-LC enzymatic activity, and we employed high-speed fluorescence-activated cell sorting (FACS) to identify numerous computationally designed variants having wild-type-like enzyme kinetics. Many of these variants exhibited decreased immunogenicity in humanized HLA transgenic mice and manifested

Indexed as

AntibodiesAnimalsGene LibraryMiceMice, TransgenicProtein DomainsAntibodiesbotulinum neurotoxincomputational librarydeimmunizationFACS

Identifiers

PMID36623275
PMCPMC9872818

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.