Evidence map›Paper›PMID 36622230›Full record

ArticleJournal of bacteriology2023

Strain-Specific Gifsy-1 Prophage Genes Are Determinants for Expression of the RNA Repair Operon during the SOS Response in Salmonella enterica Serovar Typhimurium.

Jennifer E Kurasz, Madison C Crawford, Steffen Porwollik, Oliver Gregory, Katerina R Tadlock, Eve C Balding, Emily E Weinert, Michael McClelland, Anna C Karls

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Prophage: agent provocateur?Archives of microbiology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jennifer E KuraszDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.
Madison C CrawfordDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.
Steffen PorwollikDepartment of Microbiology and Molecular Genetics, University of California-Irvine School of Medicine, Irvine, California, USA.
Oliver GregoryDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.
Katerina R TadlockDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.
Eve C BaldingDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.
Emily E WeinertDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0002-4986-8682
Michael McClellandDepartment of Microbiology and Molecular Genetics, University of California-Irvine School of Medicine, Irvine, California, USA.
Anna C KarlsDepartment of Microbiology, University of Georgia, Athens, Georgia, USA.ORCID 0000-0002-0198-1272
University of Georgia · USUniversity of California, Irvine · USPennsylvania State University · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Probing the Metabolism and Cellular Roles of 2',3'-Cyclic Nucleotide MonophosphateR01GM125842 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI WEINERT, EMILY E · 2018 to 2022
$1.6M
Defining a RNA repair system conserved in pathogenic bacteriaR21AI117102 · NIAID · UNIVERSITY OF GEORGIA · PI KARLS, ANNA C. · 2015 to 2016
$413k
Barcoding a Salmonella gene knockout libraryR03AI139557 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI MCCLELLAND, MICHAEL · 2019 to 2020
$157k
NCI NIH HHS P30 CA062203NIAID NIH HHS R03 AI139557NIAID NIH HHS R21 AI117102NIGMS NIH HHS R01 GM125842
6 · The paper itself

Abstract

The adaptation of Salmonella enterica serovar Typhimurium to stress conditions involves expression of genes within the regulon of the alternative sigma factor RpoN (σ

Indexed as

Salmonella entericaSalmonella typhimuriumBacterial ProteinsOperonPhylogenyProphagesRNASerogroupSOS Response, GeneticsTranscription FactorsBacterial ProteinsRNATranscription Factorsbacterial enhancer binding proteinbEBP activationE. coliEscherichia coliGifsy prophagesLexARecARNA repairRpoNRtcRSalmonellaSalmonella Typhimuriumsigma54SOS responsetranscription regulation

Identifiers

PMID36622230
PMCPMC9879122
OpenAlexW4313880109

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.