Evidence map›Paper›PMID 36622198›Full record

ArticleMicrobiology spectrum2023

Whole-Genome and Plasmid Comparative Analysis of Campylobacter jejuni from Human Patients in Toyama, Japan, from 2015 to 2019.

Daichi Morita, Hiroki Arai, Junko Isobe, Emi Maenishi, Takanori Kumagai, Fumito Maruyama, Teruo Kuroda

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  4. Comparative Genomic Analysis of Livestock-DerivedJournal of microbiology and biotechnology · 2025
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  5. Genomic epidemiology and genetic characteristics of clinicalAntimicrobial agents and chemotherapy · 2025
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  9. Consortium ofAntibiotics (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Daichi Morita *Department of Microbiology, Graduate School of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan.
Hiroki Arai *Department of Microbiology, Graduate School of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan.
Junko IsobeToyama Institute of Health, Toyama, Japan.
Emi MaenishiToyama Institute of Health, Toyama, Japan.
Takanori KumagaiDepartment of Microbiology, Graduate School of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan.
Fumito MaruyamaSection of Microbial Genomics and Ecology, The IDEC Institute, Hiroshima University, Hiroshima, Japan.
Teruo KurodaDepartment of Microbiology, Graduate School of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan.ORCID 0000-0003-3190-9754
Hiroshima University · JPToyama Institute of Health · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Campylobacter jejuni is a major causative agent of food poisoning, and increasing antimicrobial resistance is a concern. This study investigated 116 clinical isolates of C. jejuni from Toyama, Japan, which were isolated from 2015 to 2019. Antimicrobial susceptibility testing and whole-genome sequencing were used for phenotypic and genotypic characterization to compare antimicrobial resistance (AMR) profiles and phylogenic linkage. The multilocus sequence typing approach identified 37 sequence types (STs) and 15 clonal complexes (CCs), including 7 novel STs, and the high frequency CCs were CC21 (27.7%), CC48 (10.9%), and CC354 (9.9%). The AMR profiles and related resistant factors were as follows: fluoroquinolones (51.7%), mutation in quinolone resistance-determining region (QRDRs) (GyrA T86I); tetracyclines (27.6%), acquisition of

Indexed as

CampylobacterCampylobacter InfectionsCampylobacter jejuniAnti-Bacterial AgentsDiarrheaDrug Resistance, BacterialHumansJapanMicrobial Sensitivity TestsPlasmidsAnti-Bacterial Agentsantimicrobial resistanceCampylobacter jejunigenomic epidemiologypTet family plasmidwhole-genome sequencing

Identifiers

PMID36622198
PMCPMC9927224
OpenAlexW4313877455

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.