Evidence map›Paper›PMID 36618661›Full record

ArticleFrontiers in plant science2022

Epitranscriptome changes triggered by ammonium nutrition regulate the proteome response of maritime pine roots.

Francisco Ortigosa, César Lobato-Fernández, Juan Antonio Pérez-Claros, Francisco R Cantón, Concepción Ávila, Francisco M Cánovas, Rafael A Cañas

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Detection, distribution, and functions of RNAFrontiers in plant science · 2024
    Review
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Francisco OrtigosaGrupo de Biología Molecular y Biotecnología de Plantas, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Málaga, Spain.
César Lobato-FernándezGrupo de Biología Molecular y Biotecnología de Plantas, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Málaga, Spain.
Juan Antonio Pérez-ClarosDepartamento de Ecología y Geología, Universidad de Málaga, Málaga, Spain.
Francisco R CantónIntegrative Molecular Biology Lab, Universidad de Málaga, Málaga, Spain.
Concepción ÁvilaGrupo de Biología Molecular y Biotecnología de Plantas, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Málaga, Spain.
Francisco M CánovasGrupo de Biología Molecular y Biotecnología de Plantas, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga, Málaga, Spain.
Rafael A CañasIntegrative Molecular Biology Lab, Universidad de Málaga, Málaga, Spain.
Universidad de Málaga · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epitranscriptome constitutes a gene expression checkpoint in all living organisms. Nitrogen is an essential element for plant growth and development that influences gene expression at different levels such as epigenome, transcriptome, proteome, and metabolome. Therefore, our hypothesis is that changes in the epitranscriptome may regulate nitrogen metabolism. In this study, epitranscriptomic modifications caused by ammonium nutrition were monitored in maritime pine roots using Oxford Nanopore Technology. Transcriptomic responses mainly affected transcripts involved in nitrogen and carbon metabolism, defense, hormone synthesis/signaling, and translation. Global detection of epitranscriptomic marks was performed to evaluate this posttranscriptional mechanism in un/treated seedlings. Increased N

Indexed as

ammoniumepitranscriptomicsnitrogen nutritionONT sequencingPinus pinastertranslation

Identifiers

PMID36618661
PMCPMC9815506
OpenAlexW4312187607

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.