Evidence map›Paper›PMID 36616196›Full record

ArticlePlants (Basel, Switzerland)2022

Pathogen Resistance Depending on Jacalin-Dirigent Chimeric Proteins Is Common among Poaceae but Absent in the Dicot Arabidopsis as Evidenced by Analysis of Homologous Single-Domain Proteins.

Lara Esch, Christian Kirsch, Lara Vogel, Jana Kelm, Nikolai Huwa, Maike Schmitz, Thomas Classen, Ulrich Schaffrath

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lara EschDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.ORCID 0000-0003-2049-1882
Christian KirschDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.ORCID 0000-0003-1002-4180
Lara VogelDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.
Jana KelmDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.
Nikolai HuwaInstitute for Bioorganic Chemistry, Heinrich Heine University Düsseldorf, 52425 Jülich, Germany.ORCID 0000-0001-8779-7611
Maike SchmitzDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.
Thomas ClassenInstitute for Bio- and Geosciences 1: Bioorganic Chemistry, Forschungszentrum Jülich, 52425 Jülich, Germany.ORCID 0000-0002-3259-964X
Ulrich SchaffrathDepartment of Plant Physiology, RWTH Aachen University, 52056 Aachen, Germany.ORCID 0000-0002-3691-0888
RWTH Aachen University · DEForschungszentrum Jülich · DEHeinrich Heine University Düsseldorf · DE

Funding

Deutsche Forschungsgemeinschaft SCHA 631/10 1Deutsche Forschungsgemeinschaft Thomas Classen (369034981)RWTH Aachen University scholarships for Doctoral Students awarded to Lara Esch and Christian Kirsch
6 · The paper itself

Abstract

MonocotJRLs are Poaceae-specific two-domain proteins that consist of a jacalin-related lectin (JRL) and a dirigent (DIR) domain which participate in multiple developmental processes, including disease resistance. For OsJAC1, a monocotJRL from rice, it has been confirmed that constitutive expression in transgenic rice or barley plants facilitates broad-spectrum disease resistance. In this process, both domains of OsJAC1 act cooperatively, as evidenced from experiments with artificially separated JRL- or DIR-domain-containing proteins. Interestingly, these chimeric proteins did not evolve in dicotyledonous plants. Instead, proteins with a single JRL domain, multiple JRL domains or JRL domains fused to domains other than DIR domains are present. In this study, we wanted to test if the cooperative function of JRL and DIR proteins leading to pathogen resistance was conserved in the dicotyledonous plant Arabidopsis thaliana. In Arabidopsis, we identified 50 JRL and 24 DIR proteins, respectively, from which seven single-domain JRL and two single-domain DIR candidates were selected. A single-cell transient gene expression assay in barley revealed that specific combinations of the Arabidopsis JRL and DIR candidates reduced the penetration success of barley powdery mildew. Strikingly, one of these pairs, AtJAX1 and AtDIR19, is encoded by genes located next to each other on chromosome one. However, when using natural variation and analyzing Arabidopsis ecotypes that express full-length or truncated versions of AtJAX1, the presence/absence of the full-length AtJAX1 protein could not be correlated with resistance to the powdery mildew fungus Golovinomyces orontii. Furthermore, an analysis of the additional JRL and DIR candidates in a bi-fluorescence complementation assay in Nicotiana benthamiana revealed no direct interaction of these JRL/DIR pairs. Since transgenic Arabidopsis plants expressing OsJAC1-GFP also did not show increased resistance to G. orontii, it was concluded that the resistance mediated by the synergistic activities of DIR and JRL proteins is specific for members of the Poaceae, at least regarding the resistance against powdery mildew. Arabidopsis lacks the essential components of the DIR-JRL-dependent resistance pathway.

Indexed as

Arabidopsis (Arabidopsis thaliana)chimeric proteindirigentjacalin-related lectinrice (Oryza sativa)Rosetta stone theory

Identifiers

PMID36616196
PMCPMC9824508
OpenAlexW4312171803

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.