Evidence map›Paper›PMID 36615849›Full record

ArticleNutrients2022

Identification of Kynurenic Acid-Induced Apoptotic Biomarkers in Gastric Cancer-Derived AGS Cells through Next-Generation Transcriptome Sequencing Analysis.

Hun Hwan Kim, Sang Eun Ha, Min Yeong Park, Se Hyo Jeong, Pritam Bhagwan Bhosale, Abuyaseer Abusaliya, Chung Kil Won, Jeong Doo Heo, Meejung Ahn, Je Kyung Seong and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nutrients, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
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  4. Mechanism of action of M-XQLD treatment for asthma: role of STARD13 in Th17 suppression.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Article
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  11. Honey's Yeast-New Source of Valuable Species for Industrial Applications.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Hun Hwan KimDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.ORCID 0000-0002-4983-2321
Sang Eun HaBiological Resources Research Group, Gyeongnam Department of Environment Toxicology and Chemistry, Korea Institute of Toxicology, 17 Jegok-gil, Jinju 52834, Republic of Korea.ORCID 0000-0002-4964-8700
Min Yeong ParkDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.
Se Hyo JeongDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.
Pritam Bhagwan BhosaleDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.ORCID 0000-0003-1691-7844
Abuyaseer AbusaliyaDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.ORCID 0000-0001-6088-1485
Chung Kil WonDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.
Jeong Doo HeoBiological Resources Research Group, Gyeongnam Department of Environment Toxicology and Chemistry, Korea Institute of Toxicology, 17 Jegok-gil, Jinju 52834, Republic of Korea.
Meejung AhnDepartment of Animal Science, College of Life Science, Sangji University, Wonju 26339, Republic of Korea.
Je Kyung SeongLaboratory of Developmental Biology and Genomics, BK21 PLUS Program for Creative Veterinary Science Research, Research Institute for Veterinary Science, College of Veterinary Medicine, Seoul National University, Seoul 08826, Republic of Korea.ORCID 0000-0003-1177-6958
Hyun Wook KimDivision of Animal Bioscience & Intergrated Biotechnology, Jinju 52725, Republic of Korea.
Gon Sup KimDepartment of Veterinary Medicine, Research Institute of Life Science, Gyeongsang National University, Jinju-daero, Jinju 52828, Republic of Korea.ORCID 0000-0001-7048-458X
Gyeongsang National University · KRKorea Institute of Toxicology · KRSangji University · KRSeoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the triggers and therapeutic targets for gastric cancer, one of the most common cancers worldwide, can provide helpful information for the development of therapeutics. RNA sequencing technology can be utilized to identify complex disease targets and therapeutic applications. In the present study, we aimed to establish the pharmacological target of Kynurenic acid (KYNA) for gastric cancer AGS cells and to identify the biological network. RNA sequencing identified differentially expressed genes (DEGs) between KYNA-treated and untreated cells. A total of 278 genes were differentially expressed, of which 120 genes were up-regulated, and 158 genes were down-regulated. Gene ontology results confirmed that KYNA had effects such as a reduction in genes related to DNA replication and nucleosome organization on AGS cells. Protein-protein interaction was confirmed through STRING analysis, and it was confirmed that cancer cell growth and proliferation were inhibited through KEGG, Reactome, and Wiki pathway analysis, and various signaling pathways related to cancer cell death were induced. It was confirmed that KYNA treatment reduced the gene expression of cancer-causing AP-1 factors (Fos, Jun, ATF, and JDP) in AGS cell lines derived from gastric cancer. Overall, using next-generation transcriptome sequencing data and bioinformatics tools, we confirmed that KYNA had an apoptosis effect by inducing changes in various genes, including factor AP-1, in gastric cancer AGS cells. This study can identify pharmacological targets for gastric cancer treatment and provide a valuable resource for drug development.

Indexed as

Stomach NeoplasmsTranscriptomeBiomarkersComputational BiologyGene Expression ProfilingGene Expression Regulation, NeoplasticHumansKynurenic AcidTranscription Factor AP-1BiomarkersKynurenic AcidTranscription Factor AP-1AGS cellsAP-1DEGsnext-generation sequencingRNA sequencing

Identifiers

PMID36615849
PMCPMC9823332
OpenAlexW4313471610

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.