Evidence map›Paper›PMID 36615520›Full record

ArticleMolecules (Basel, Switzerland)2022

The First Snake Venom KTS/Disintegrins-Integrin Interactions Using Bioinformatics Approaches.

Oussema Khamessi, Hazem Ben Mabrouk, Selim Kamoun, Chaima Hkimi, Kais Ghedira, Riadh Kharrat

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Oussema KhamessiLaboratoire des Venins et Biomolécules Thérapeutiques, Pasteur Institute of Tunis, University of Tunis El Manar, 13 Place Pasteur BP 74, Tunis 1002, Tunisia.ORCID 0000-0002-3617-5705
Hazem Ben MabroukLaboratoire des Venins et Biomolécules Thérapeutiques, Pasteur Institute of Tunis, University of Tunis El Manar, 13 Place Pasteur BP 74, Tunis 1002, Tunisia.
Selim KamounLaboratory of Bioinformatics, Biomathematics and Biostatistics (LR20IPT09), Pasteur Institute of Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.
Chaima HkimiLaboratory of Bioinformatics, Biomathematics and Biostatistics (LR20IPT09), Pasteur Institute of Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0002-9167-2480
Kais GhediraLaboratory of Bioinformatics, Biomathematics and Biostatistics (LR20IPT09), Pasteur Institute of Tunis, University of Tunis El Manar, Tunis 1002, Tunisia.ORCID 0000-0002-3387-6493
Riadh KharratLaboratoire des Venins et Biomolécules Thérapeutiques, Pasteur Institute of Tunis, University of Tunis El Manar, 13 Place Pasteur BP 74, Tunis 1002, Tunisia.
Tunis University · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Snake venom contains a number of active molecules that have been shown to possess high anti-tumor activities; disintegrins are an excellent example among these. Their ability to interact and bind with integrins suggests that they could be very valuable molecules for the development of new cancer therapeutic approaches. However, in the absence of a clear Lysine-Threonine-Serine (KTS) Disintegrins Integrin interaction model, the exact compound features behind it are still unknown. In this study, we investigated the structural characteristics of three KTS-disintegrins and the interaction mechanisms with the α1β1 integrin receptor using in silico bioinformatics approaches. Normal mode analysis showed that the flexibility of the KTSR motif and the C-terminal region play a key role and influence the KTS-Disintegrin-integrin interaction. Protein-protein docking also suggested that the interaction involving the KTSR motif is highly dependent on the residue following K21, S23 and R24. These findings contribute to a better understanding of the KTS-Disintegrin-Integrin structural differences and their interactions with α1β1 receptors, which could improve the selection process of the best active molecules for antitumor therapies.

Indexed as

DisintegrinsSnake VenomsAmino Acid SequenceIntegrinsDisintegrinsIntegrinsSnake Venomsanti-tumorbioinformaticsintegrinKTS-disintegrinsnormal modes analysisprotein-protein docking

Identifiers

PMID36615520
PMCPMC9822126
OpenAlexW4313389092

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.